Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g494 ATGACTACCCTCTTCACCTTTTTCTTGTTCCTCTTGCCCATCTTGCTTCTCCTGGTTAGGAGGAGGAGTTCAGCAAAAAGGGTCCCTCCAGGTTCCCTAGGACTGCCCATAATAGGCCAAAGCATCAGCCTTCTGCGGGCAATGAGAGCCAACACTGCTGAACAGTGGCTTCAAGAGAGGGTAAGAAAGTATGGTCCGGTTTCAAAGCTCAGCCTCTTTGGCAAACCAGCTGTTTTTATCTTTGGGCCGGCTGCACACAAGCTCATATTTGGCAGTGACGCCAACACTGTTAGTAACCAGCAAGCAAAGTCCAATCAGATGATACTGGGTGACCGGAACTTGCTGGAGCTCATGGGAGAAGATCATAAGCGTGTCAGGGGTGCTCTAGTGTCATTCTTGAAACCAGAATCCCTGAAGCAGTATGTGGGAAGGATGGATGCAGAGGTCAGGAATCACCTTCAGTTGAATTGGGAAGGCAAGCAAAGGGTCACTGTGTTGCCCTTGATGAAGGGCCTCACGTTTGACATTATTTGCGGCCTCCTATTTGGGCTAGAGCAAGGAACCCGAAGGGAGGAACTTGTGAGCAGATTCCAGCAGATGATAGCAGGTATCTGGTCAGTCCCGTTCAATTTGCCTTTCACACGGTACAACCACAGCCTGCAGGCTAGTTCAGAGGTTCAAACCAAGATAAAGGAACTTATACACGAGAAGAGGCAGGAACTTGAGAGGGGAGCTTCACCAAACCAAGATCTCATCACCCGCTTGCTCAGTATCCGTGATGAAAACAATCAACAAGTGTTATCCGAGGATGAGATTGTGCACAATGTCATGCTTGTCATGGTTGCCGGGCATGACACTTCAGCTATTTTGATTACTTTCATGGTGCGGCTTCTGGCTAATGATCCCCATATCTATGCAGCTGTTCTTCAAGAACAAGAGGAGATAGCAAAAGGCAAGGCCCCGGGTGAGTTCCTAACATGGGAAGATCTAGCAAAGATGAAGTACACATGGAGAGTAGCATTGGAAACTCTGAGGTTGTATCCTCCTGTTCTTTCTACCTTCAGGACTGCAATGAAAGATATCAAGTTCGGCGGATACACCATCCCTAGGGTGGAAGATACTCTGGGTTTCAACCATGACCCACATGGATGA 1152 48.26 MTTLFTFFLFLLPILLLLVRRRSSAKRVPPGSLGLPIIGQSISLLRAMRANTAEQWLQERVRKYGPVSKLSLFGKPAVFIFGPAAHKLIFGSDANTVSNQQAKSNQMILGDRNLLELMGEDHKRVRGALVSFLKPESLKQYVGRMDAEVRNHLQLNWEGKQRVTVLPLMKGLTFDIICGLLFGLEQGTRREELVSRFQQMIAGIWSVPFNLPFTRYNHSLQASSEVQTKIKELIHEKRQELERGASPNQDLITRLLSIRDENNQQVLSEDEIVHNVMLVMVAGHDTSAILITFMVRLLANDPHIYAAVLQEQEEIAKGKAPGEFLTWEDLAKMKYTWRVALETLRLYPPVLSTFRTAMKDIKFGGYTIPRVEDTLGFNHDPHG* 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6327723 6329625 - Vvi19g494 Vvi19g494 781993

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g494 383 SUPERFAMILY Cytochrome P450 21 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g494 383 Pfam Cytochrome P450 29 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g494 383 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g494 383 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g494 383 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g494 383 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g494 383 PANTHER OS07G0520300 PROTEIN 7 370 - -
Vvi19g494 383 PANTHER CYTOCHROME P450 26 7 370 - -
Vvi19g494 383 Gene3D Cytochrome P450 19 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g494 - - - vvi:100255495 726.472
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g494 . . Bda07g00357 Bda09g00396 . . . . . . . Cma09g00945 . Car09g00859 Sed10g2110 Cpe06g00761 . Bhi09g01887 Tan01g3346 Cmetu01g0289 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo09g00944 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60