Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g50 ATGACAAAATTGAAAACCCTAGATCTGAATTTTAACAAACTAACTGGAGAAATTCCAAGCAGCTTTGTTGGTGTATCAAAGGCAGATTACATGAATTTTACCAGAAACATGCTAACTAGAGCCATGCCTGATTGGATGCTGAAAAGAGGAGACAACTATGATCTTTCATTCAATAACTTTACTAATATTTCTTTTCAGTTTTATTTTGCTGTAAGCTTTAATTACCCAAAAAAGTTTTACTCCATGCGCATAAATTGTGGTGGAAAAGAAGTAATTGTTGATGGGAATACCAAATATGAAGATGATACAGATTCTGGTGGACCATCAAAGTTCTATCAGAGTAGAACAAACTGGGCATTCAGCAGCACTGGTCACTTCATGGACAATGACCGTCCCACGGACTCCTTCATTGGGACAAACATGTCTAGATTCACCATGGAAAATTCTGGACTGTATACAACTGCACGCCTGTCTGCCCTGTCTCTCACTTTTTATGGATTTTGTCTGGAAAATGGAAACTACACAGTAAAGCTTCACTTTGCAGAGATCACCTTTACTGATGACAAAACATATAGCAGCCTTGGAAGGCGTTTGTTTGATGTTTATGTTCAGCATGAGCTGGTTCTCAAGGATTTCAATATTGAGGATGAAGCAGGGGGTGTTGGTAAGGAAATCATAAAATTTTTTACTGCAGTTGTGACTAATAATGCCTTGGAAATTCGCTTCTATTGGGCTGGGAAAGGGACTACAGGTATCCCAGTTAGAGGAATTTATGGTCCTCTTATATCAGCTGTTTCTGTGGACCCTGATTTTTTACCTCCTTCCAGAAATGGCAGTAGTAGTATATCTGTGAGCATTGTGGTTGGCATTGTGGCTGGAGTCATTCTTCTTATCTTCCTGGTTATCAGTATCCTTTGGTGGAGAGGCTGCCTAAGGCGCAAATATACATTGGAACAAGATTTAAAGGGTCTAGATCAGCAAACTGATTTGTTTACCCTAAGGCAAATTAAGGCTGCCACAAACAACTTTGATGCTAACAACAAAATTGGAGAAGTTGGATTTGGTTCTGTTTACAAGGGCCTCTTATCGGATGGCACCATAATTGCAGTGAAGCAGCTTTCTTCCAAGGCAAAACAAGGAAAACCATGA 1149 39.51 MTKLKTLDLNFNKLTGEIPSSFVGVSKADYMNFTRNMLTRAMPDWMLKRGDNYDLSFNNFTNISFQFYFAVSFNYPKKFYSMRINCGGKEVIVDGNTKYEDDTDSGGPSKFYQSRTNWAFSSTGHFMDNDRPTDSFIGTNMSRFTMENSGLYTTARLSALSLTFYGFCLENGNYTVKLHFAEITFTDDKTYSSLGRRLFDVYVQHELVLKDFNIEDEAGGVGKEIIKFFTAVVTNNALEIRFYWAGKGTTGIPVRGIYGPLISAVSVDPDFLPPSRNGSSSISVSIVVGIVAGVILLIFLVISILWWRGCLRRKYTLEQDLKGLDQQTDLFTLRQIKAATNNFDANNKIGEVGFGSVYKGLLSDGTIIAVKQLSSKAKQGKP* 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 549307 557539 - Vvi19g50 Vvi19g50 781549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g50 382 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 72 381 - -
Vvi19g50 382 Gene3D Phosphorylase Kinase; domain 1 310 382 - -
Vvi19g50 382 SUPERFAMILY Protein kinase-like (PK-like) 327 376 IPR011009 -
Vvi19g50 382 Gene3D Ribonuclease Inhibitor 1 74 IPR032675 -
Vvi19g50 382 Gene3D - 78 268 - -
Vvi19g50 382 SUPERFAMILY L domain-like 2 67 - -
Vvi19g50 382 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 381 - -
Vvi19g50 382 Pfam Malectin domain 81 265 IPR021720 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g50 - - vvi:100265805 631.328