Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g596 ATGCCTGAAACACAGATTTCCAATGGGTTCAGTGAGCCTCGCCTTGTGGTGAGAAAATTCTTGGCTAGGCCTCAGCATGAAGGAGCTGGAGCCATTGTCAGGAGAAGCATAGGAAGGTTTGAGCTGAAATACTTCGATCCTTTTCTTGTTTTGGATGAATTCTCAGTTTCTGCTCCTGCTGGGTTTCCTGATCACCCCCACAGAGGTTTTGAGACAGTTACCTACATGTTACAGGGAGCTGTTCAACATGAAGATTTTGAAGGGCACAAGGGGTCAATAGAGGCAGGTGATTTACAGTGGATGACCGCAGGAAGAGGGATCGTTCACTCAGAAATGCCTGCAGCCACCGGTGTCCAAAAGGGTCTGCAGTTGTGGATCAACCTCTCCTCCAAAAATAAGATGATCGAGCCGAGGTACCAAGAAATAGAGAGTAAGAACATCGCAGAAGCTACAAAAGACGGGATCAAGGTGAGGGTCATAGCAGGGGAGGCCTTGGGGAAAAAATCACCAGTATACACAAAGACCCCCACCATGTATCTGGACTTCACTCTGAGTCCAGGAGCTCAGCTGCAGCAGCCCATACCCATAAAATGGAACGCGTTTGTGTATGTCTTGGAAGGTGAAGGGGTGTTTGGGAACCCAAAAAATCTTCCCACAACAGCCCACCACCTGCTCCTTCTAGGCTCAGGTGATGGGCTGGAAGCATGGAACAAGTCCCTGAAGCCCCTCAGATTCGTTTTGGTTGGGGGTGAGCCCTTGGGGGAGCCTGTGGTGCAGTTAGGCCCCTTTGTGATGAACACCCAGGAAGAGATTGACAGAACAATTGAGGATTATGAAAACTGCATCAATGGATTTGAGAAGGCTAAATACTGGAGGTCTGAAGTTCTTCGTTTCTAG 897 48.83 MPETQISNGFSEPRLVVRKFLARPQHEGAGAIVRRSIGRFELKYFDPFLVLDEFSVSAPAGFPDHPHRGFETVTYMLQGAVQHEDFEGHKGSIEAGDLQWMTAGRGIVHSEMPAATGVQKGLQLWINLSSKNKMIEPRYQEIESKNIAEATKDGIKVRVIAGEALGKKSPVYTKTPTMYLDFTLSPGAQLQQPIPIKWNAFVYVLEGEGVFGNPKNLPTTAHHLLLLGSGDGLEAWNKSLKPLRFVLVGGEPLGEPVVQLGPFVMNTQEEIDRTIEDYENCINGFEKAKYWRSEVLRF* 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7622502 7624507 + Vvi19g596 Vvi19g596 782095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g596 298 Pfam Pirin C-terminal cupin domain 179 281 IPR008778 -
Vvi19g596 298 Gene3D Jelly Rolls 148 253 IPR014710 -
Vvi19g596 298 PANTHER - 7 294 - -
Vvi19g596 298 PIRSF Pirin 12 292 IPR012093 -
Vvi19g596 298 Gene3D Jelly Rolls 27 279 IPR014710 -
Vvi19g596 298 SUPERFAMILY RmlC-like cupins 14 294 IPR011051 -
Vvi19g596 298 PANTHER PIRIN-RELATED 7 294 IPR012093 -
Vvi19g596 298 Pfam Pirin 34 126 IPR003829 -
Vvi19g596 298 CDD cupin_pirin_C 176 252 - -
Vvi19g596 298 CDD cupin_pirin_N 33 128 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g596 K06911 - vvi:100241784 603.208