Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g604 ATGAAATCCAGCACAGAGACCTCCGATAATGGCTTTCTCCAAAGCCTCTCAACTTCATCGCTCCGCAAGCTCCTTCCCAAATCCAAGCACAAATCATCCTCATTTCGCACAAAGCCCAAATCTAACTCCGAAAACACTGATCCCAACACTCAACTGACTGATTCCCAACCGCTGCCTTCCGTCACCAAGCAATCACCACCGGAGCCAATTTTTTCCAAAGAAGTCACCAGATCGGACAGCCAGAAAGGGCTACCGATGCCTCCGGAGCCGGATCCAACCGTCAAGGTTGTGGTGAGAATTAGGCCTGTAAATGAGCATGAGAGGGAGGGTGAACGGACGGTGAAGAAACTTTCTTCAGATACATTGTCGGTTGGGGATCGGAAGTTCATGTTTGATTCAGTCTTAGATTCGAGTTCGAAGCAGGAAGATATTTTTCAGTTGGTTGGCGTGCCCTTAGTTAAAGATGCATTAGCTGGTTACAACACTTCGATTTTGTCATATGGACAGACTGGAAGCGGAAAGACTTACACAATGTGGGGTCCCCCAAGTGCCATGGTTGAGGGTCAATCCACCACCAGTCACCTGGGCATTGTTCCTCGAATTTTCCAGATGCTGTTTGCTGAGATTCAGAAAGAACAAGAGAACTTTGTAGGCAAGCAGATAAATTATCAGTGTCGGTGTTCATTCCTTGAGATATATAATGAACAAATTGGGGATTTACTTGATCCAACCCAGAGGAACCTTGAGATAAAGGATGATCCCAAAAATGGGTTTTATGTTGAGAATTTGACTGAGGAATATGTGACTAGCTATGAGGACGTAACTCAAATTTTGATCAAGGGGCTTTCAAGTAGAAAAGTTGGGGCAACAAGCATAAATTCAAAGAGCTCTCGATCCCATGTTGTGTTTACTTGCATCATTGAGTCTTGGTGCAAGGAAACCTCATCAAAATGTTTTGGTAGTTCCAAAACAAGCAGAATCAGCCTTGTTGATCTTGCAGGAATGGAAAGAAATAAACTAGATGATGCTGGTATACTAAGAGTACGGGAAGGCAAAAATGTAAAGAAGTCCCTATCACAGCTTGGGCTCTTGGTGAATGTTCTTGCTAAAGGAACTCAAATTGAGAGGCCCAAAGACATTCCTTACAGAAGTTCCTCTTTAACACATATGCTGCGAGAATCGCTTGGTGGCAATGCCAAACTAACAGTTATCTGTGCCATCTCCCCAGATAGCAAGAGTAATGGTGAAACACTGAGCACACTCAGATTTGGACAGAGAGCAAAATGCATATCAAATGAGCCAGTGATAAATGAAATAACTGAGGATCATGTCAATGATTTGAGTGATAAGATTCGCCAATTGAAGGAAGAACTTATAAGAGCAAAATCAGATGTATATAATTCCACTGGAAGTAACAATGGATACTTTAAAGGGAGAAATGTACGTGAAAGCTTGAATCAATTGAGAGTAAGCCTCAATCGCTCCTTGCTTCTTCCCCACATAGATAATGATTCTGAGGAAGAGCTAAATATTGATGAGCATGATGTAAGGGAATTACATCTGCAGCTAGATAACTTGCATAAAAATTCTGAGATGGACTTGATGAGTGAACCTGACATTAGCTGTCAAGAAGAAGGTGAAACAGGAGAAATAAACTTGGAAATACCTCAGAAGGAACTTCCTCACAACAACATGGCCACAACTATGGATAATCCTATGGATGTCCCTTCAAGAACTATGAATCCTGCATCCAGAAGTAGCCTTTCAATCAGTTCATGTCGTCAGTCTCCATTTCTCCAAGACCCTACATTGTCTGAGTCTCCAAGAATAGGAAATTCCCTGAGGAAAAGCATAATTTTCTCATCAAGCTCTTTGGCAAGTCAAAACAATGCTTCAAACAGTTTCAAGTTGAATTCAGATGTATTGCACCAGTCGCTCAAACAAAGTGATCAGATTCGATCCTCTTTGCAGTCAAGCAAGGTAATTCCAGGCACCACTGAGTCACTGGCTGCTAGCCTTCAAAGAGGTTTACAGATAATTGACTATCACCAGCGGAACTCTGCATCAAACAAATCTTCAGTTGCCTTCTCCTTTGAACACTTGGCACTGAAACCATGTCCAGAAGTAGAGAAAGTTGATGCCTCTGTTCAAAAATTTCCGGAAGAGAAGCCATCTCTAGATGCACCATCTGCTACTTTCTTGTGCACTTCTTGCCGGCGAACAGGATTTGATGGCTCTGATGAAGTCCAGGATAGCTTGAAGAGATGGATTGTAGCTGCAGATGAATCAGGGAATTCTAATGGATTGGCCAATCCAGTGTACAAAGTATCCATGAAGAGACAGAAGGAGCTAGAAAACGTTTGTATGGAGCAAGCAGCTAAAATTGAGCAGCTAAACCGTCTGAGTTCCACCACAAAATATAGCCAGGAAAGCAATACTCTTCATCTTGAAGCTGGTAACAAAGAAATAATAGCACTTGGGGAGATTAAAAATGAAGAGTACAAGCTTCTGAAATTCCATTGTGATGAGAATCATGAGCTAGAAATTATAAAGGAAATAAAGGAAGTCCAGGAAGAAACCAAGCGTGAGTGCAGGAATACATCCTTTGACATGAATGAGAAAGAAGCACTTCTTAAGGAAATTCAAAGTTTAAGGAACAAGTTGGAGTCTGATGCATCTGCAAAAATGTCTACTGAAAAACTGAGATCTTCTTTGCTCTCACGTTCCATTCAACTGCAAAAAAGTGTAGATTCTCATAATAATAGCGAGGAAGAACTAGAGAGGGAAAGGCAGAGATGGACAGAAATGGAGAGCGATTGGATTTCTCTAACAGATGAACTGAGGATTGATATTGAATCCCACCGCAGGCGGGCAGAGAAGATGGAGATGGAGTTGAGATTGGAGAAGAAGTGCACCGAAGAGTTGGATGATGCACTTCATAGAGCTGTCCTTGGGCACGCTAGATTTGTTGAACACTATGCTGACCTACAAGACAAGCATAATGAGTTGGCTGAAAAGCACCGGAATATCATGGAAGGGATAGCAGAGGTGAAGAGGGCAGCTGCAAAAGCAGGAGCTAAAGGCAATGGCTCTCGTTTTCACAAGTACCTGGCTGCAGAGCTTTCAACCCTGAGAAGGGAGAAGGAGAGAGAGAGGGAACACTTGATAAAGGAGAACAAGAGTCTCAAACTTCAACTCAGAGACACAGCAGAAGCTGTTCATGCTGCAGGGGAACTCCTTGTCAGGCTCAGAGAAGCTGAGGAAGCAGCCTCAGTCTCTGAGGACAACTACAATATGGTTCAGCAAGAGAATGAGAGGTTGAAAAAGCAAATGGAGAAGCTAAAGAGAAAACACAAGATGGAGATGGTGACAATGAAACAGTACCTTGCAGAGAGCAGGCTGCCACAATCTGCAATACTGAGTAGGGAGGATTCTGATATAGCAGAGAACAACATGATCTCTACTCCAGATGATGATCAGGCATGGAGAGCAGAGTTTGGAGCTATATATCAGGAGCATTACTAG 3525 42.75 MKSSTETSDNGFLQSLSTSSLRKLLPKSKHKSSSFRTKPKSNSENTDPNTQLTDSQPLPSVTKQSPPEPIFSKEVTRSDSQKGLPMPPEPDPTVKVVVRIRPVNEHEREGERTVKKLSSDTLSVGDRKFMFDSVLDSSSKQEDIFQLVGVPLVKDALAGYNTSILSYGQTGSGKTYTMWGPPSAMVEGQSTTSHLGIVPRIFQMLFAEIQKEQENFVGKQINYQCRCSFLEIYNEQIGDLLDPTQRNLEIKDDPKNGFYVENLTEEYVTSYEDVTQILIKGLSSRKVGATSINSKSSRSHVVFTCIIESWCKETSSKCFGSSKTSRISLVDLAGMERNKLDDAGILRVREGKNVKKSLSQLGLLVNVLAKGTQIERPKDIPYRSSSLTHMLRESLGGNAKLTVICAISPDSKSNGETLSTLRFGQRAKCISNEPVINEITEDHVNDLSDKIRQLKEELIRAKSDVYNSTGSNNGYFKGRNVRESLNQLRVSLNRSLLLPHIDNDSEEELNIDEHDVRELHLQLDNLHKNSEMDLMSEPDISCQEEGETGEINLEIPQKELPHNNMATTMDNPMDVPSRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIGNSLRKSIIFSSSSLASQNNASNSFKLNSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKSSVAFSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSATFLCTSCRRTGFDGSDEVQDSLKRWIVAADESGNSNGLANPVYKVSMKRQKELENVCMEQAAKIEQLNRLSSTTKYSQESNTLHLEAGNKEIIALGEIKNEEYKLLKFHCDENHELEIIKEIKEVQEETKRECRNTSFDMNEKEALLKEIQSLRNKLESDASAKMSTEKLRSSLLSRSIQLQKSVDSHNNSEEELERERQRWTEMESDWISLTDELRIDIESHRRRAEKMEMELRLEKKCTEELDDALHRAVLGHARFVEHYADLQDKHNELAEKHRNIMEGIAEVKRAAAKAGAKGNGSRFHKYLAAELSTLRREKEREREHLIKENKSLKLQLRDTAEAVHAAGELLVRLREAEEAASVSEDNYNMVQQENERLKKQMEKLKRKHKMEMVTMKQYLAESRLPQSAILSREDSDIAENNMISTPDDDQAWRAEFGAIYQEHY* 1175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7676336 7684445 - Vvi19g604 Vvi19g604 782103

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g604 1174 ProSiteProfiles Kinesin motor domain profile. 93 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g604 1174 PANTHER CENTROMERE PROTEIN E 72 1174 - -
Vvi19g604 1174 Coils Coil 781 801 - -
Vvi19g604 1174 Pfam Kinesin motor domain 109 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g604 1174 Coils Coil 871 894 - -
Vvi19g604 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 462 IPR027417 -
Vvi19g604 1174 Coils Coil 437 464 - -
Vvi19g604 1174 MobiDBLite consensus disorder prediction 1 23 - -
Vvi19g604 1174 MobiDBLite consensus disorder prediction 561 607 - -
Vvi19g604 1174 MobiDBLite consensus disorder prediction 555 607 - -
Vvi19g604 1174 Coils Coil 944 964 - -
Vvi19g604 1174 PRINTS Kinesin heavy chain signature 159 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g604 1174 PRINTS Kinesin heavy chain signature 290 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g604 1174 PRINTS Kinesin heavy chain signature 326 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g604 1174 PRINTS Kinesin heavy chain signature 380 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g604 1174 PANTHER KINESIN-LIKE PROTEIN KIN-12F 72 1174 - -
Vvi19g604 1174 Coils Coil 1083 1124 - -
Vvi19g604 1174 Coils Coil 1038 1072 - -
Vvi19g604 1174 Gene3D Kinesin motor domain 90 469 IPR036961 -
Vvi19g604 1174 Coils Coil 909 939 - -
Vvi19g604 1174 MobiDBLite consensus disorder prediction 38 79 - -
Vvi19g604 1174 MobiDBLite consensus disorder prediction 1 93 - -
Vvi19g604 1174 SMART kinesin_4 91 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g604 K10400 KIF15; kinesin family member 15 - vvi:100253712 2162.88
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40