Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g610 | ATGCCAGCGGTGAGCCCCGATCAATCTGATCGGGATTCAGAGCCGTTTGTGGAGGTAGATCCGACTAGAAGATATGGTCGGTACAATGAACTGCTTGGCTGTGGTGCAGTGAAGAGGGTGTACCGTGCTTTTGATCAGGAGGAGGGCATAGAGGTGGCTTGGAACCAGGTGAAATTAAGGGCTTTTAGTGATGACAAGCCAATGATTGATCGGCTTTTCTCTGAAGTTCGATTGCTCAAGACTCTTAAGGACAAGAACATCATTGCTCTGTACAATGTGTGGCGAAATGAGGATCATAACACCTTGAATTTCATAACTGAAGTGTGTACATCTGGTAATTTGAGGGAGTATCGGAAGAAGCATAGACATGTTTCCATGAAGGCACTGAAGAAATGGTCAAAGCAGATTTTGAAGGGTTTAGACTATTTGCATAGGCATGAACCCTGTATTATTCATAGGGATCTCAACTGCAGTAATGTCTTCATCAATGGCAATGTGGGTAAGGTGAAGATCGGTGATTTTGGATTGGCAGCAACAGTGGGGAAGAGCCATGTAGCACATTCAGTGCTTGGAACACCAGAATTCATGGCTCCAGAGCTATATGAAGAGGACTACACAGAACTAGTAGACATATACTCATTTGGTATGTGCTTTCTAGAGATGGTCACATTAGAAATCCCATACAGCGAATGTGACAACATCGCCAAAATATACAAAAAGGTGATATCTGGGGCTAGACCTCGGGCCATGGACAAGGTCAGGGACCCTGAGGTGAAGGCATTCATCGAAAAGTGCCTGGCAAAGCCAAGGGCAAGACCCTCAGCTTCAGAGCTCCTCAATGACCCATTTTTCCATGGAATTGATGATGACGAAATTGACAACAGTGATAGTTAG | 894 | 44.85 | MPAVSPDQSDRDSEPFVEVDPTRRYGRYNELLGCGAVKRVYRAFDQEEGIEVAWNQVKLRAFSDDKPMIDRLFSEVRLLKTLKDKNIIALYNVWRNEDHNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILKGLDYLHRHEPCIIHRDLNCSNVFINGNVGKVKIGDFGLAATVGKSHVAHSVLGTPEFMAPELYEEDYTELVDIYSFGMCFLEMVTLEIPYSECDNIAKIYKKVISGARPRAMDKVRDPEVKAFIEKCLAKPRARPSASELLNDPFFHGIDDDEIDNSDS* | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 7730104 | 7732118 | - | Vvi19g610 | Vvi19g610 | 782109 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g610 | 297 | ProSiteProfiles | Protein kinase domain profile. | 26 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g610 | 297 | CDD | STKc_WNK | 24 | 284 | - | - | |
Vvi19g610 | 297 | Pfam | Protein kinase domain | 29 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g610 | 297 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 1 | 296 | - | - | |
Vvi19g610 | 297 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 289 | - | - | |
Vvi19g610 | 297 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 291 | IPR011009 | - | |
Vvi19g610 | 297 | MobiDBLite | consensus disorder prediction | 271 | 297 | - | - | |
Vvi19g610 | 297 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 107 | - | - | |
Vvi19g610 | 297 | PIRSF | TyrPK_CSF1-R | 118 | 281 | - | - | |
Vvi19g610 | 297 | PIRSF | TyrPK_CSF1-R | 23 | 131 | - | - | |
Vvi19g610 | 297 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 1 | 296 | - | - |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76469 | PF00069 | Pkinase | 4.80E-54 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g610 | K08867 | - | vvi:100257136 | 589.341 |