Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g63 ATGGAGAACTTGTCTCTTATTCTGTTGTTGTTTCTGGGTTTCTTTTGCTTTGTGGAGTTCACATCCCACGCGCAAGATATACCGGAAGATGAAGCTCTTAACACAATATCCTCCAAATTAAATATATCTGCAAAATTAAATAACAGCTATTGGAGTGTCAGCCAGTCTTCTTGCAGAGAGGGTCGAGATTTCAACGTAAACATCACATCAGAGATTCGAAGCCTTGTCACCTGCAACTGCACTTTCGTCAACTCCACTGTCTGCCATGTGACAAACATCCAGCTGAAGGGTCTTAATTTGACTGGAGTTTTACCTGCTGAATTTGGAAGTCTTAAGTATCTGCAAGAACTTGATCTCACCCGCAACTATTTCAATGGATCAATACCTACAAGTTTCTCTCGGCTTCCTCTTGTTAACCTGTCCCTTTTGGGGAACCGTCTATCTGGATCAATTCCTAAGGAAATTGGTGGTATTGCTACACTTGAGGAGCTGATCTTGGAAGATAATCAACTAGAAGGACCACTTAATGAAAACCTTGGAAATTTGGGCCGTTTGAGGAGACTCCTTCTCTCTGGAAACAATTTCACAGGAACGATACCGCAAAATTTTCGCAATCTGAAGAATTTAACTGATTTTAGGATAGATGGGAATAATTTATTCGGGAAAATACCTGATTTAATTGGGAACTGGACCAAACTTGACAAACTGTTTCTTCAAGGCACATCAATGGAGGGCCCCATTCCTTCGACTATATCCCAGTTGAAAAACTTAACTGAGTTGATGATATCTAATTTGAATGGAGCAAGCATGTCTTTTCCTGATTTGCAGGATATGAAGAATATGACAAGATTGGCACTGAGAGATTGCTTGATTACTGGTCAAATCCCTCCCTATCTTGGAGAAATGAAAAAATTAAAAATCTTAGATCTGAGCTTCAACCGACTGACCGGTCAAATTCCCGAAAGCCTACAGAGTTTGGACTCTATAGATTACATGTTTCTGAATGACAACTTGCTAAGTGGAGAAGTACCCAGAGGGATATTAAACTGGAAAGAAAACGTTGATTTATCTTACAACAATTTTACAGGATCACCTCCATCTACTTGCCAGCAAAACGATGTGAGCTTTGTTTCCAGTTATTCATCTTCAAAGAGTAGCACAGTACAATGGTGCTTAAAGAAGGACCTCCCGTGCCCTGAAAAACCCAGATATCATTCCTTTTTTATCAACTGTGGAGGAGGCAAGATGAGTTTTGAAGGGAATGAATATGACAAGGACGTAGATGGAAGGGGTGCATCACATTTTCTTGCTGATTATTTAGAAAGATGGGCTTACAGTAGTACAGGGGTTTTCAGCAAAGAAGACACTGCTTACCTCGCCAATAACACATCTCTGAAAATAATCGGCCCAGAATTCTACCAAACAGCTCGCGTTGCTCCTAACTCACTCAAGTATTATGGGCTTTGCCTACAAAAGGGCAGTTACAAAGTGCGGCTCCACTTTGCTGAAATCATGTTTACTAATGATCAGACCTTTAGTAGCTTGGGGAAGCGCATTTTTGATGTTTCAATTCAAGGGAATGTAGTTTTAAAGGATTTTAATATTATGGAAGAAGCGAAAGGTGCTGGTAAGGGCATTTATAAGGACTTTGATGATGTTCTCGTTAATGGTAGCACTCTGGAGATCCACTTATACTGGTCAGGCAAAGGGACCAAATCTATTCCAGTAAGAGGTGTTTATGGACCTCTTATATCCGCCATTGCAGTGACTCCAAACTTTGATCCCAACGCTGGGCTATCTGTTGGAGCTATCATCGGCATTGTAATGGCTTCATGTGTGGTCCTTGCGTTCATTTTGGCACTTCTATGGACGAAAGGTTACCTTGGAGGAAAAGACCTTGAAGATAAAGAACTCCGTGCTCTAGAGCTGCAAACCGGTTATTTCAGCTTACGACAGATCAAAGCTGCTACAAATAACTTTGACTCTGCAAATAAGATAGGTGAAGGCGGATTTGGGCCTGTTTACAAGGGTGTCCTGTCGGATGGTTCGATAATTGCTGTTAAGCAGCTCTCCTCTAAATCAAAACAAGGGAACCGAGAATTTGTAAATGAAATAGGCATGATATCTGCCTTACAACACCCAAATCTTGTGAGGCTTTATGGTTGTTGCATTGAAGGAAACCAGTTGCTGCTAATATATGAATATATGGAAAACAACAGCCTTGCCCGTGCGCTCTTTGGTCGTGAAGAACACCGTTTACATTTGGACTGGCCAACAAGAAAGAAGATTTGTTTGGGGATAGCAAGGGGACTCGCATATCTTCATGAGGAATCGAGATTGAAAATTGTTCATAGAGATATAAAGGCAACCAATGTGCTTCTTGATAAGGATCTAAGTGCTAAGATATCTGATTTTGGTTTGGCTAAGCTGGATGAAGAAGAGAACACCCACATCAGCACAAGAATAGCTGGAACAATAGGATATATGGCTCCTGAATATGCAATGAGGGGTTACTTGACTGACAAAGCAGACGTATACAGCTTTGGAGTTGTTGCCCTTGAGATTGTCAGTGGGAAAAGCAACACCAATTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCTTATGTCCTACATGAGCAGGGAAACATTCTGGAACTCGTAGACCCAATTCTCGGTTCTAACTACTCTGAAGAAGAGGCGGCAAAGATGCTGAACTTGTCTCTCTTATGCACCAACCCATCTCCCACTCTCAGGCCATCCATGTCTTCTGTAGTGAGCATGCTCGAAGGCAAAATTGCTGTCCAAGCACCAATAGTCAAGAAGAGCTCAATGAACCAGGACATGAGGTTCAAAGCCTTTGAGAAGTTGTCACAGGACAGCCAGTCTCATGTCTCAGCATTCTCCCAAGAAAGCCAGGTGCAAGGCAGCATATCAATGAACGGGCCGTGGATAGACTCCTCTGTTTCCCTTACCAGCAGAGAAGACACCCGTGACCATTCTTCATCAAGCAAGCTCCTTCCAGAACTCCCAGACCTCTACGACGTACATCTAGACTAA 3066 42.14 MENLSLILLLFLGFFCFVEFTSHAQDIPEDEALNTISSKLNISAKLNNSYWSVSQSSCREGRDFNVNITSEIRSLVTCNCTFVNSTVCHVTNIQLKGLNLTGVLPAEFGSLKYLQELDLTRNYFNGSIPTSFSRLPLVNLSLLGNRLSGSIPKEIGGIATLEELILEDNQLEGPLNENLGNLGRLRRLLLSGNNFTGTIPQNFRNLKNLTDFRIDGNNLFGKIPDLIGNWTKLDKLFLQGTSMEGPIPSTISQLKNLTELMISNLNGASMSFPDLQDMKNMTRLALRDCLITGQIPPYLGEMKKLKILDLSFNRLTGQIPESLQSLDSIDYMFLNDNLLSGEVPRGILNWKENVDLSYNNFTGSPPSTCQQNDVSFVSSYSSSKSSTVQWCLKKDLPCPEKPRYHSFFINCGGGKMSFEGNEYDKDVDGRGASHFLADYLERWAYSSTGVFSKEDTAYLANNTSLKIIGPEFYQTARVAPNSLKYYGLCLQKGSYKVRLHFAEIMFTNDQTFSSLGKRIFDVSIQGNVVLKDFNIMEEAKGAGKGIYKDFDDVLVNGSTLEIHLYWSGKGTKSIPVRGVYGPLISAIAVTPNFDPNAGLSVGAIIGIVMASCVVLAFILALLWTKGYLGGKDLEDKELRALELQTGYFSLRQIKAATNNFDSANKIGEGGFGPVYKGVLSDGSIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVRLYGCCIEGNQLLLIYEYMENNSLARALFGREEHRLHLDWPTRKKICLGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLSAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLHEQGNILELVDPILGSNYSEEEAAKMLNLSLLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIVKKSSMNQDMRFKAFEKLSQDSQSHVSAFSQESQVQGSISMNGPWIDSSVSLTSREDTRDHSSSSKLLPELPDLYDVHLD* 1022
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 669184 677944 + Vvi19g63 Vvi19g63 781562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g63 1021 Gene3D Transferase(Phosphotransferase) domain 1 736 947 - -
Vvi19g63 1021 Gene3D Ribonuclease Inhibitor 29 161 IPR032675 -
Vvi19g63 1021 Pfam Malectin domain 407 587 IPR021720 -
Vvi19g63 1021 Pfam Leucine Rich Repeat 304 326 IPR001611 GO:0005515
Vvi19g63 1021 Pfam Protein tyrosine and serine/threonine kinase 663 930 IPR001245 GO:0004672|GO:0006468
Vvi19g63 1021 SMART serkin_6 660 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g63 1021 Gene3D Phosphorylase Kinase; domain 1 630 735 - -
Vvi19g63 1021 ProSiteProfiles Protein kinase domain profile. 660 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g63 1021 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 296 - -
Vvi19g63 1021 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 379 994 - -
Vvi19g63 1021 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 291 368 - -
Vvi19g63 1021 SUPERFAMILY L domain-like 75 370 - -
Vvi19g63 1021 Gene3D Ribonuclease Inhibitor 269 391 IPR032675 -
Vvi19g63 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Vvi19g63 1021 Gene3D Ribonuclease Inhibitor 166 268 IPR032675 -
Vvi19g63 1021 SUPERFAMILY Protein kinase-like (PK-like) 644 947 IPR011009 -
Vvi19g63 1021 Gene3D - 405 592 - -
Vvi19g63 1021 PANTHER - 291 368 - -
Vvi19g63 1021 PANTHER - 379 994 - -
Vvi19g63 1021 PANTHER - 68 296 - -
Vvi19g63 1021 CDD STKc_IRAK 666 933 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g278 Vvi19g63 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76470 PF07714 PK_Tyr_Ser-Thr 3.40E-49 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g63 - - vvi:100243601 1954.87