Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g668 ATGAGACCAAAAGTTGGCTGCAGCTCCTCTACTTACGCAATTCATCTCTTTCCTCTCCTCTTCCTGAAACCACAGTTTCGAGCTCAATCTTGTGCTCAGAACTACACCCCCCACTGCTCAATCTTCGTTCTCTCTCAAAAGAACGGACGCATTTTCTCTCTCTGCCCCACAATGCAGCTCCTCCCGGGCTCTGCAAGGACCCTCATGCTCAGTCTCTCGGCCTTGCTCCTCCTGTTATGCTGCGCCACCGAGGCGCACAATATCACCAGCATTCTAGCTAAGAACCCTGAGTTCTCCACCTTCAACCACTACCTCACAGTCACACACCTCGCCAACGAGATCAACCTCCGGGAGACCATCACTGTGTGTGCTGTCGACAATCCCGGAATGTCGGATCTGCTTGCTAAAGGCCTCTCCATCTACGCCATCAAGAACGTCCTTTCTCTGCACATTCTTCTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCACCAACGGCACCGCTCTCGCCGCCACCATGTACCAGGCTACCGGCTCCGCCCCCGGATCCTCCGGCTTCGTCAACATCACTGATCTCAAAGGGGGCAAGGTAGGGTTCGATCAGCAAGATCCTGCCACATATGAGGACAACCTAGAGGGAGGTTTAACTGTGTTTTGCCCTATGGACGACGTGTTCAAGAGCTTTCTGCCCAAGTACAAGAATCTAACGGCGGACGGGAAGCTATCGCTGCTGTTGTACCACGGCATTCCGGTGTACCAGTCGCTGTCGCTGTTGAAATCCAGCAACGGAGTGATGAACACCCTGGCCACCGACGGAGCCAAAAAGTACGATTTCACCGTGCAGAACGACGGCGAAGTGGTGACGCTAAAGACGAAGATTGTGACGGCGAGGATCACCGGAACATTACTGGACGAACAGCCGCTGGGAATTTTCACAATCGACAAGGTTTTGTTGCCCAAAGAATTGTTCAAGGCCGAAGCACCGGCTCCTGCTCCCGCACCGGCGCCTGAAGCCGATGCTCCCACTACAAAGAAGAGCTCTCCACCGGCGCCAGTCTCCCCTGCGGAAGCTCCCAACGAAGATCCAGCGGACCAAACGGCTGATGATAACGGTTCCGTCAGATATAACGGCGGGAGATTCGTTGCTCTACTGCTGAGCTCATCGCTGGGCTTGCTAATGGATTGTGAATTATATGGGATGGGAAACAACCTCTGA 1218 54.11 MRPKVGCSSSTYAIHLFPLLFLKPQFRAQSCAQNYTPHCSIFVLSQKNGRIFSLCPTMQLLPGSARTLMLSLSALLLLLCCATEAHNITSILAKNPEFSTFNHYLTVTHLANEINLRETITVCAVDNPGMSDLLAKGLSIYAIKNVLSLHILLDYFGAKKLHQITNGTALAATMYQATGSAPGSSGFVNITDLKGGKVGFDQQDPATYEDNLEGGLTVFCPMDDVFKSFLPKYKNLTADGKLSLLLYHGIPVYQSLSLLKSSNGVMNTLATDGAKKYDFTVQNDGEVVTLKTKIVTARITGTLLDEQPLGIFTIDKVLLPKELFKAEAPAPAPAPAPEADAPTTKKSSPPAPVSPAEAPNEDPADQTADDNGSVRYNGGRFVALLLSSSLGLLMDCELYGMGNNL* 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8597169 8601079 + Vvi19g668 Vvi19g668 782167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g668 405 MobiDBLite consensus disorder prediction 329 372 - -
Vvi19g668 405 SMART fasc_3 217 321 IPR000782 -
Vvi19g668 405 SUPERFAMILY FAS1 domain 211 321 IPR036378 -
Vvi19g668 405 Gene3D FAS1 domain 203 320 IPR036378 -
Vvi19g668 405 Pfam Fasciclin domain 209 320 IPR000782 -
Vvi19g668 405 Gene3D FAS1 domain 84 202 IPR036378 -
Vvi19g668 405 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 206 378 - -
Vvi19g668 405 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 66 204 - -
Vvi19g668 405 SUPERFAMILY FAS1 domain 91 195 IPR036378 -
Vvi19g668 405 ProSiteProfiles FAS1/BIgH3 domain profile. 171 318 IPR000782 -
Vvi19g668 405 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 206 378 IPR033254 -
Vvi19g668 405 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 66 204 IPR033254 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi12g705 Vvi19g668 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g668 - - aip:107616720 345.895