Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g691 ATGAAGGTCATGGACAAAGGGTCTCTAGCAAGTCGTAAGAAGCTGCTTCGGGCTCAGACAGAAAGAGAGATTCTCCAATCCTTGGACCATCCCTTCCTTCCAACCTTATACACCCATTTTGAGACCGAAAAATTCTCTTGTTTGGTGATGGAGTTCTGCCCAGGAGGTGATTTACACACACTTAGGCAGAGGCAACCTGGGAAGCATTTTTCCGAGCAAGCTGTAAAGTTCTATGTAGCAGAGGTTCTTCTTGCTCTTGAATACCTTCACATGCTTGGGATTGTTTATCGTGACCTGAAGCCAGAGAATGTCCTTGTGAGGGAAGACGGGCACATTATGCTTTCAGATTTTGACCTCTCTCTGCGGTGCACTGTCAGCCCAACACTGGTCAAGTCCTCTTCTTTTGACACTGAACCCTTACGAAGGAACCCAGTCTATTGTGTCCAACCTACTTGCATTGAACCCTCTTGTATTCAGCCATCCTGTGTGGCCCCAACAACATGTTTTTCCCCTCGCCTATTTTCAAGTAAATCCAAAAAGGACCGGAAACCCAAGAATGAAATTGGAAACCAAGTGAGCCCATTGCCAGAGCTCATTGCAGAGCCAACTGGGGCTCGCTCAATGTCATTTGTGGGGACGCACGAGTACCTTGCACCTGAAATCATCAAGGGTGAAGGTCATGGCAGTGCACCACTGCGGTTCCCGGAGTCACCAGTGGTCAGTTTTTCAGCAAGGGATCTGATAAGGGGCTTGCTGGTAAAGGAGCCACAGCACAGATTGGCATATAAACGAGGGGCAACAGAAATCAAACAACACCCCTTCTTCGAGGGTGTCAACTGGGCTTTGATTCGATGCGCGAGCCCTCCCGAGATCCCAAAGCCAGTTGAGATTGAGCGAGTGCCAGCTCCAGCAGCCTCAAGCAGTGAAAAAGCAGCAGCTGCCATGGCGGGGCCTGATCAGAAAAGTTGTGATAATTATCTGGAATTTGATTTCTTTTAA 999 48.55 MKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSSFDTEPLRRNPVYCVQPTCIEPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAPLRFPESPVVSFSARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEIPKPVEIERVPAPAASSSEKAAAAMAGPDQKSCDNYLEFDFF* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8904731 8909949 - Vvi19g691 Vvi19g691 782190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g691 332 Pfam Protein kinase domain 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g691 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Vvi19g691 332 PANTHER FLIPPASE KINASE 1-RELATED 231 332 - -
Vvi19g691 332 PANTHER FLIPPASE KINASE 1-RELATED 1 230 - -
Vvi19g691 332 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 230 - -
Vvi19g691 332 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 231 332 - -
Vvi19g691 332 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g691 332 Gene3D Transferase(Phosphotransferase) domain 1 61 229 - -
Vvi19g691 332 MobiDBLite consensus disorder prediction 176 196 - -
Vvi19g691 332 Gene3D Phosphorylase Kinase; domain 1 1 60 - -
Vvi19g691 332 Gene3D Transferase(Phosphotransferase) domain 1 230 292 - -
Vvi19g691 332 SUPERFAMILY Protein kinase-like (PK-like) 1 308 IPR011009 -
Vvi19g691 332 SMART serkin_6 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76474 PF00069 Pkinase 1.40E-30 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g691 K08286 - vvi:100258297 644.425