Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g75 ATGGGATTAGGTATATATATAGATATATATGATTCATTGCATGAAGGTCCTTTCCTGTGGTTTTCATTTTCATTTCATGGTGTGGCTATTTGCTTTTCTGTGCTCTATGCAATTCCCATTGCATTCATGAACTATAACCCCGTTTTCATGCAAACTGAAATTACACAGATTCAAATGGATGAAAACCTTGTAGTCGATCCACTGCAGCCCAATGCACAAAACATCTTGTTTCTGCATCTATTATCATATCTTGATGAGCAATTAGTTTTTATATATCTTCCTTTTCTTGCAGACTTTGATTCTAATCCAGGGCTGTCTGTCAGAGGTGTTATTGGTATTGTAATGGCTTCATGTTTGAAGAGAACGCCCACATCAGCACAAAATAGCTGGAACAAGTATATACAAGACTCAACATTCAGTTTGATTATCTTTGCAATTGGGAAATCTTTTGGCTTCCTGCACATCCTTTCTGGACAGTCTTTTCCTTTCATTTTCAAGTTTCATTATCATTTTCAAGGTATGAGATTCAAAGCCTTTGAGAAGCTTTCACTGGACAGCCAGCTTCAATATTCTCTCAGGCCAGCTCAACTTCTGCCAGAGGATGAAGTGCAAACTCTTGAGACAATAGCCACAAGATTGAATAACAGATACTGGAACATCAGCCAAACCTCTTGTGGAGGAGGTTTCAATGTGAATTTCACCTCCGACTATTTTAGCAACGTTACATGTGACTGTACTTTCGAGAACTCCACTGTTTGCCATGTCACAAACATCCAGCTGAAGGGTCTTAATTTAACTGGTATTATGCCTGATGAGTTTGGAAATCTTACTTACCTGCAAGAAATTGATCTCACCCGCAACTATCTCAATGGATCAATCCCTACAAGTCTTGCCCAGATTCCTCTTGTCACTCTGTCTGCTTTGGGAAACCGTCTCTCTGGGTCAATTCCTAAGGAAATTGGTGACATTGCTACACTTGAGGAGCTGGTCTTGGAAGATAATCAGCTAGAAGGATCCCTTCCTGAAAACCTTGGAAATTTGAGCAGTTTGAGTAGACTCCTTCTTACTGCAAACAATTTTACGGGAACAATACCAGAAACGTTTGGCAATCTGAAAAATTTAACTGATGTTCGGTTAGATGGGAATGCATTTTCAGGGAAGATACCAGATTTTATTGGGAATTGGACCCAACTTGACAGGCTAGATATGCAAGGCACATCCATGGACGGTCCCATTCCTTCTACCATATCCCTGTTGACAAACTTGACTCAGTTGAGAATAGCTGATTTGAATGGATCATCTATGGCTTTCCCCAACTTGCAGAATTTGACAAAGATGGAAGAACTGGTACTGAGAAATTGCTCAATTACCGACTCAATCCCAGACTACATTGGAAAAATGGCATCTTTGAAAACATTAGACCTGAGCTTCAACAGATTGAGTGGTCAAGTTTCAGATACATGGAGTTTGTCACAACTGGAATATCTGTTTCTGACTAACAACTCTTTGAGTGGAACACTACCCAGTTGGATATCAGACAGCAACCAGAAATTTGATGTATCTTACAACAACTTTACAGGGCCGTCGTCTCTCACAGTTTGCCAGCAAAGGGCCGTGAACTTAGTTTCCAGTTTTTCATCTTCAGACAGCAACTCAGTATTATGGTGTCTTAAGAAGGGTCTCCCCTGCCCTGGAAATGCCAAACACTATTCCTTGTTTATTAATTGTGGAGGATCTGAGATTAACTACGAGGGAAATGACTATGAAAGGGACTTAGATGGATCGGGTGCATCACACTTCAGTGATTATTCAGAAAAATGGGGTTATAGTAGCACAGGGGTTTTCACAAACAATGACGATGCTGCTTATGTAGCAACAAACACATTTTCTCTGAATATAACGGGTCCAGAGTACTTACAAACAGCTCGCACTTCTCCTATATCGCTCAAGTATTATGGTCTCTGCATGCGAAAGGGCAGCTACAGAGTGCAACTCCACTTTGCTGAAATTATGTTTTCTGATGATGAGACATTTAGCAGCTTGGGGAAGCGCATTTTTGATGTTTCTATCCAAGGGGTTACAGTCTTGAAGGATTTTAACATTGTGGAGGAAGCTAAAGGTGTTGGTAAAGCCATCACTAAGGATTTTGAGACTTCTGTTAATGGTAGCACTCTGGAGATCCATTTATACTGGGCAGGCAAAGGGACTAATGCCATTCCTAGTAGAGGTGTATATGGACCTCTTATATCCGCTATTACAGTGACACCAAACTTTGATGTCAGCACAGGGCTATCTGCTGGAGCTATTGCTGGTATTGTAATTGCTTCAATTGCGGCTGTTGTTTTGATTTTGATAGTCCTCAGACTGACAGGCTACCTAGGAGGGAAAGACCAAGAAGATAAAGAACTTCAAGCACTAAAGCTACAAACTGGTTATTTCAGTTTAAGACAGATCAAAGCTGCTACCAATAACTTTGATCCTGCAAATAAGATAGGTGAAGGTGGATTTGGGCCCGTTTACAAGGGTGTACTCCCAGATGGTTCAGTAATTGCGGTCAAGCAGCTCTCCTCCAAATCAAAACAAGGGAACCGTGAATTTGTCAATGAGATAGGCATGATATCTGCCTTGCAACACCCAAATCTAGTGAAGCTTTATGGCTGGTGTATTGAAGGAAACCAGTTGTTGCTCATATACGAATATTTGGAAAACAATTGTCTTGCACGTGCACTTTTTGGTCGCATTGAACAGCGGCTAAATTTGGACTGGCCAACAAGAAATAAAATATGCTTGGGGATAGCAAGGGGACTGGCATATCTACACGAGGAGTCAAGGTTGAAAATTGTTCACAGAGATATCAAGGCAACCAATGTGCTGCTTGATAAGGATCTAAATGCGAAGATATCTGACTTTGGTTTAGCTAAACTTGATGAAGAAGAGAACACACACATCAGCACACGTATCGCTGGAACAATAGGATACATGGCTCCTGAATATGCGATGAGGGGTTACTTGACAGACAAAGCAGATGTTTACAGCTTTGGAATCGTTGCTCTAGAGATTGTCAGTGGGAAAAGCAACACCAATTACAGGCCCAAGGAGGAGTTTGTCTATCTTCTTGACTGGGCTTATGTCCTACAAGAGCAAGAAAACCTTCTCGAACTCGTGGATCCAAGTCTTGGTTCGAAGTACTCCAAAGAAGAGGCACAAAGGATGCTGAACTTGGCTCTCCTGTGCGCCAACCCGTCTCCCACTCTCAGGCCATCCATGTCTTCTGTAGTGAGTATGCTCGAAGGCAAAACTGCAGTCCAAGTACCATTAATCAAGCGTAGCTCAATGAATTCAATGAATTTGGATATGAGGTTCAAAGCCTTCGAGAAGCTGTCACAGGACAGCCAAACATATGTCTCAGAGCGCTCTCAAGGCAGTCAAATGCAAAGGAGCATGTCAATGGATGGACCATGGTTTGGTTCCTCAGTTTCCTTCCCTGATAAAGACAAGACCCGAGAACATTCTTCATCAAGCAAACAGAAACTTCTCCATGACTAA 3546 41.65 MGLGIYIDIYDSLHEGPFLWFSFSFHGVAICFSVLYAIPIAFMNYNPVFMQTEITQIQMDENLVVDPLQPNAQNILFLHLLSYLDEQLVFIYLPFLADFDSNPGLSVRGVIGIVMASCLKRTPTSAQNSWNKYIQDSTFSLIIFAIGKSFGFLHILSGQSFPFIFKFHYHFQGMRFKAFEKLSLDSQLQYSLRPAQLLPEDEVQTLETIATRLNNRYWNISQTSCGGGFNVNFTSDYFSNVTCDCTFENSTVCHVTNIQLKGLNLTGIMPDEFGNLTYLQEIDLTRNYLNGSIPTSLAQIPLVTLSALGNRLSGSIPKEIGDIATLEELVLEDNQLEGSLPENLGNLSSLSRLLLTANNFTGTIPETFGNLKNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQGTSMDGPIPSTISLLTNLTQLRIADLNGSSMAFPNLQNLTKMEELVLRNCSITDSIPDYIGKMASLKTLDLSFNRLSGQVSDTWSLSQLEYLFLTNNSLSGTLPSWISDSNQKFDVSYNNFTGPSSLTVCQQRAVNLVSSFSSSDSNSVLWCLKKGLPCPGNAKHYSLFINCGGSEINYEGNDYERDLDGSGASHFSDYSEKWGYSSTGVFTNNDDAAYVATNTFSLNITGPEYLQTARTSPISLKYYGLCMRKGSYRVQLHFAEIMFSDDETFSSLGKRIFDVSIQGVTVLKDFNIVEEAKGVGKAITKDFETSVNGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGLSAGAIAGIVIASIAAVVLILIVLRLTGYLGGKDQEDKELQALKLQTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLPDGSVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGWCIEGNQLLLIYEYLENNCLARALFGRIEQRLNLDWPTRNKICLGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQENLLELVDPSLGSKYSKEEAQRMLNLALLCANPSPTLRPSMSSVVSMLEGKTAVQVPLIKRSSMNSMNLDMRFKAFEKLSQDSQTYVSERSQGSQMQRSMSMDGPWFGSSVSFPDKDKTREHSSSSKQKLLHD* 1182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 846311 864401 + Vvi19g75 Vvi19g75 781574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g75 1181 Gene3D Ribonuclease Inhibitor 416 561 IPR032675 -
Vvi19g75 1181 Pfam Malectin domain 571 752 IPR021720 -
Vvi19g75 1181 ProSiteProfiles Protein kinase domain profile. 825 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g75 1181 SUPERFAMILY Protein kinase-like (PK-like) 810 1116 IPR011009 -
Vvi19g75 1181 SMART serkin_6 825 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g75 1181 PANTHER - 233 1162 - -
Vvi19g75 1181 Pfam Protein tyrosine and serine/threonine kinase 829 1096 IPR001245 GO:0004672|GO:0006468
Vvi19g75 1181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 947 959 IPR008271 GO:0004672|GO:0006468
Vvi19g75 1181 CDD STKc_IRAK 831 1098 - -
Vvi19g75 1181 SUPERFAMILY L domain-like 233 483 - -
Vvi19g75 1181 MobiDBLite consensus disorder prediction 1162 1181 - -
Vvi19g75 1181 Gene3D - 567 757 - -
Vvi19g75 1181 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 233 1162 - -
Vvi19g75 1181 MobiDBLite consensus disorder prediction 1132 1154 - -
Vvi19g75 1181 Gene3D Phosphorylase Kinase; domain 1 793 900 - -
Vvi19g75 1181 Gene3D Ribonuclease Inhibitor 229 415 IPR032675 -
Vvi19g75 1181 Pfam Leucine rich repeat 445 503 IPR001611 GO:0005515
Vvi19g75 1181 MobiDBLite consensus disorder prediction 1132 1181 - -
Vvi19g75 1181 Gene3D Transferase(Phosphotransferase) domain 1 901 1113 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g267 Vvi19g75 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76479 PF07714 PK_Tyr_Ser-Thr 1.70E-48 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g75 - - vvi:100260595 1902.49