Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g753 ATGAGGCTTTCTCTGCTTCCTTCTTTACTTCTCTCATTCCTTCTCTTTTTGCTGTTACAGATGCCCACTTTTGCCACCAAAAAGGCAAGCATTTCATTACCATTCATCATATGGGGTTTTCATTTTTGTTTTTTTTTCTTTTCCTTTTTCCTTCTTTTTTCTGTGCTGCAGTCTTATATAGTTTACTTGGGAGCGCATTCACATGGCCCAGAGCCTACGTCTGTTGATCTCGATCGCGTGACAAATTCCCATTATGATTTTCTGGGATCTTTCTTGGGAAGCAATGAGAAGGCAAAGGACGCCATGTTCTACTCCTATAACAAGAACATCAATGGCTTCGCTGCAATCCTCGAAGAGGAAGAAGCAGCGGAAATTGCAAAGCATCCAAATGTTATATCAGTTTTCTTGAACAAGGGAAGGAAACTGCACACAACCCGGTCATGGCATTTCCTTGACTTGGAAAAGAATGGAGTCATTCAACCGAATTCAATTTGGAAGAAAGCCAGGTTTGGTGAAGATACAATTATCGGAAACCTTGACACAGGTGTTTGGCCTGAATCAAAGAGCTTTAGTGATGAGGGAATGGGACTAGTTCCATCAAAGTGGCGGGGGACATGTCAGGATGAAACCAAAAATGCTGTTACTTGCAACAGGAAGCTTATTGGAGCAAGGTACTTCAACAAAGGTTATGCTGCTTATGCTGGTCCACTCAACTCCTCCTTCAACTCAGCGCGCGACCATGAAGGACATGGCTCCCACACCCTATCTACTGCTGGGGGTAGCTTAGTTTATGGAGCAAGTGTGTTTGGTTATGGTAATGGTACCGCAAAAGGCGGGTCACCAGGAGCTCGTGTGGCTGCTTACAAGGTGTGCTGGCCCCAAGTCAACAATGGTGGGTGCTTTGATGCAGACATCATGGCTGCATTTGATGCTGCTATACACGATGGTGTTGATGTTCTATCAGTATCTCTTGGTGGGGACGCCAGTGATTATTTCACAGATGGTCTTGCAATTGGTTCTTTCCATGCTGTTAAGAGGGGCATTGTTGTAGTTTCCTCTGCTGGAAATGATGGGCCAAAGGATGCGTCGGTATCAAACGTATCACCCTGGATGATAACGGTTGGTGCTAGTACCATTGACAGGGAATTCACAAATTACGTTGCTCTTGGCAATAGAAAGCACCTCAAGAACGAACACCTGCAGATGGGCATGAGCCTCTCAACCAAAGGCTTGCCATCAAACAAGTTCTATCCAGTGATCAGCAGTTTAGATGCTAAAGCTGCCAATGCGTCTGCTCAAGATGCCATTCTCTGTAAGCCCGGAACCCTCAACCCAAAGAAGGTGAAGGGGAAGATCTTGGTCTGCCTTCGAGGGGAAAATCCAAGAGTTGACAAGGGCGAGCAGGCTGCACTTGCAGGCGCTGTTGGGTTCATTCTAGCTAATGATATGCAGAGTGGAAATGAACTCATAGCCGACCCTCACGTGCTTCCTGCTTCCCATGTCAACTTCTCTGATGGTGCAGCTGTCTTTAATTACATCAACTCTACCAAGAACCCCATGGCTTACCTAACCCGTGTGAGGACCCAATTGGGAATAAAGCCTGCTCCATTTATGGCCTCTTTTTCATCGAAGGGACCCAACACCATTACACCAGAAATTCTCAAGCCTGATATAACTGCCCCAGGGGTGAATATCATAGCTGCATACAGCGAATCAATAGGGCCAACTGATCAAACATTTGACAAACGTCGAATTCCTTTCAACGCACAATCAGGCACATCCATGTCCTGCCCTCACATCTCTGGCATTGTGGGCCTTCTCAAAACCCTTCACCCTGATTGGAGCCCTGCAGCTATCAAATCCGCAATCATGACAAGTGCAAGAACACGAGATGACAATATGGAGCCGATGCTGAACTCATCAAACCTTAAAGCAACTCCATTCAGCTATGGTGCAGGCCATGTTAGACCAAACCGGGCCATGGATCCTGGACTGGTATATGACTCCACTGTTAATGACTACCTCAACTTCCTATGTGCCATTGGGTACAATGAGACCCAACTTCAAATATTCTCACAGAAGCCATACAAGTGCCCCAAGTCCTTCAGTCTCACAGGCTTCAACTACCCTTCAATCACAGCTCCTAATCTCTCAGGCTCAGTTACCATTTCCAGAACTGTCAAGAATGTTGGCACTCCCGGCACGTATACGGCGAGTGTCAAGGCACCACCTGGAATTTCAGTTGCGGTGAAGCCCAATAAATTGGAGTTCAGGGAGTATGGTGAGGAGAAGAGCTTCCGTCTTACCCTGAAAGCTAAAGGACGTCGGGTGGCTGAGGACTATGTTTTCGGACGATTGATATGGTCAGATGGTCAGCACTACGTTAGGAGTTCTATTGTTGTCAAGGCCTAA 2412 46.52 MRLSLLPSLLLSFLLFLLLQMPTFATKKASISLPFIIWGFHFCFFFFSFFLLFSVLQSYIVYLGAHSHGPEPTSVDLDRVTNSHYDFLGSFLGSNEKAKDAMFYSYNKNINGFAAILEEEEAAEIAKHPNVISVFLNKGRKLHTTRSWHFLDLEKNGVIQPNSIWKKARFGEDTIIGNLDTGVWPESKSFSDEGMGLVPSKWRGTCQDETKNAVTCNRKLIGARYFNKGYAAYAGPLNSSFNSARDHEGHGSHTLSTAGGSLVYGASVFGYGNGTAKGGSPGARVAAYKVCWPQVNNGGCFDADIMAAFDAAIHDGVDVLSVSLGGDASDYFTDGLAIGSFHAVKRGIVVVSSAGNDGPKDASVSNVSPWMITVGASTIDREFTNYVALGNRKHLKNEHLQMGMSLSTKGLPSNKFYPVISSLDAKAANASAQDAILCKPGTLNPKKVKGKILVCLRGENPRVDKGEQAALAGAVGFILANDMQSGNELIADPHVLPASHVNFSDGAAVFNYINSTKNPMAYLTRVRTQLGIKPAPFMASFSSKGPNTITPEILKPDITAPGVNIIAAYSESIGPTDQTFDKRRIPFNAQSGTSMSCPHISGIVGLLKTLHPDWSPAAIKSAIMTSARTRDDNMEPMLNSSNLKATPFSYGAGHVRPNRAMDPGLVYDSTVNDYLNFLCAIGYNETQLQIFSQKPYKCPKSFSLTGFNYPSITAPNLSGSVTISRTVKNVGTPGTYTASVKAPPGISVAVKPNKLEFREYGEEKSFRLTLKAKGRRVAEDYVFGRLIWSDGQHYVRSSIVVKA* 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9748020 9752714 - Vvi19g753 Vvi19g753 782252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g753 803 Pfam Subtilase family 171 639 IPR000209 GO:0006508|GO:0008236
Vvi19g753 803 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 57 802 - -
Vvi19g753 803 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 54 143 IPR037045 -
Vvi19g753 803 SUPERFAMILY PA domain 435 526 IPR046450 -
Vvi19g753 803 Pfam Peptidase inhibitor I9 58 143 IPR010259 -
Vvi19g753 803 ProSiteProfiles Serine proteases, subtilase domain profile. 147 661 - -
Vvi19g753 803 ProSitePatterns Serine proteases, subtilase family, serine active site. 592 602 IPR023828 -
Vvi19g753 803 Pfam Fibronectin type-III domain 707 801 IPR041469 -
Vvi19g753 803 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Vvi19g753 803 PRINTS Subtilisin serine protease family (S8) signature 246 259 IPR015500 -
Vvi19g753 803 PRINTS Subtilisin serine protease family (S8) signature 591 607 IPR015500 -
Vvi19g753 803 CDD PA_subtilisin_like 386 523 - -
Vvi19g753 803 Gene3D Peptidase S8/S53 domain 173 674 IPR036852 GO:0004252|GO:0006508
Vvi19g753 803 Gene3D - 380 530 - -
Vvi19g753 803 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 802 IPR045051 -
Vvi19g753 803 SUPERFAMILY Subtilisin-like 142 665 IPR036852 GO:0004252|GO:0006508
Vvi19g753 803 CDD Peptidases_S8_3 141 627 IPR034197 -
Vvi19g753 803 Gene3D - 678 803 - -
Vvi19g753 803 Pfam PA domain 434 508 IPR003137 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi12g747 Vvi19g753 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g753 - - vvi:100251507 1478.38