Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g79 ATGACGTCGGGGGCGAGGCTGCCGACATGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGCGGCGGAGGAGGGCCATCGCGGCGAAGATTTTCGCCGGACTGAGAATGTACGGAAACTACAAGCTCCCCAAGCACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAGGCCGGATGGACCGTCGAGCCCGACGGCACCACCTACCGGAAGGGATGCAAGCCTGTTGAACGCATGGACATTGTGGGTGGATCCGCATCAGCAAGCCCGTGCTCATCTTATCACCCAAGCCCTTCTTCCCCATCTATACATCCATAG 321 57.94 MTSGARLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDIVGGSASASPCSSYHPSPSSPSIHP* 107
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 897657 902185 - Vvi19g79 Vvi19g79 781578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g79 106 MobiDBLite consensus disorder prediction 85 106 - -
Vvi19g79 106 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 100 - -
Vvi19g79 106 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 102 IPR008540 -
Vvi19g79 106 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 100 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vvi19g79 106 MobiDBLite consensus disorder prediction 1 21 - -
Vvi19g79 106 MobiDBLite consensus disorder prediction 87 106 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14444 PF05687 BES1_N 2.00E-57 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g79 - - vvi:100241756 154.836