Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g79 | ATGACGTCGGGGGCGAGGCTGCCGACATGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGCGGCGGAGGAGGGCCATCGCGGCGAAGATTTTCGCCGGACTGAGAATGTACGGAAACTACAAGCTCCCCAAGCACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAGGCCGGATGGACCGTCGAGCCCGACGGCACCACCTACCGGAAGGGATGCAAGCCTGTTGAACGCATGGACATTGTGGGTGGATCCGCATCAGCAAGCCCGTGCTCATCTTATCACCCAAGCCCTTCTTCCCCATCTATACATCCATAG | 321 | 57.94 | MTSGARLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDIVGGSASASPCSSYHPSPSSPSIHP* | 107 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 897657 | 902185 | - | Vvi19g79 | Vvi19g79 | 781578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g79 | 106 | MobiDBLite | consensus disorder prediction | 85 | 106 | - | - | |
Vvi19g79 | 106 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 4 | 1 | 100 | - | - | |
Vvi19g79 | 106 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 102 | IPR008540 | - | |
Vvi19g79 | 106 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 100 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Vvi19g79 | 106 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Vvi19g79 | 106 | MobiDBLite | consensus disorder prediction | 87 | 106 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
14444 | PF05687 | BES1_N | 2.00E-57 | No_clan | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g79 | - | - | vvi:100241756 | 154.836 |