Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g795 ATGAAGAGAGGGTGGAGGGCATCGTGGTCCGAAGAGCATGGGGTTGGCCTGTTTTGCTTTCTGTTGCTGCTAATGGCGTCAGACGCCAAAGATTTGTCTGATGATGATGATGATGTGGTGGGGTTATTGGCTTTCAAGTCCTCCTCCGTCGTGTCCGATCCCACTGGGTTCTTGAGTGATTGGAGTCATGATTCTCCCCGTCCCTGCGCGTGGAGGGGCGTCTCGTGCTCCTCCAGTGGCCGGGTGGTTGCGCTCGACCTCACCAACGCTGGCCTGGTTGGTTCTCTCCAGCTTTCTCGACTTTTGGCGCTTGAAAATCTTCGACACGTCCATTTTCACGGCAATCACTTCTCGGAGGGCGACCTCTCCCGTCTCGCCTTCGGCCCTTCTCTGCTCCAGCTCGACCTTTCCCGCAATAAAATTTCTGATTCAGCTTTCGTCGACCACTTTCTCTCCAACTGTCAGAATTTGAATCTTTTCAATCTCTCCGATAATAAGCTTGCTGCCAAACTGAGCGCCTCCTCTCTCTCTCCCTGCAAAAACCTCTCCACCCTTGACCTCTCTTACAATCTCTTGTCTGGGGAGATGCCCTTTGGGGAATGTGGGAATCTTACTGTGCTCGATCTGTCCCACAATGATTTCTCTGGCACCGACTTCCCACCCAGCCTGAGAAATTGCGAGCTTCTTGAGACGCTTGACCTTTCTCATAATGTGCTAGAGTACAAGATCCCAGGGGACTTGTTGGGGAACCTCAGGAATTTGCGGTGGTTGTCGCTGGCCCATAATCGTTTCATGGGTGAGATTCCCCCAGAACTGGCTGCAACTTGTGGGACTCTGCAGGGGCTGGACCTTTCTGCAAACAACCTTTCTGGTGGGTTCCCTTTGACTTTTGCATCCTGCTCGTCTCTGGTTAGCCTCAACCTGGGCAACAATAGGCTGTCCGGGGATTTCCTTACCATGGTCATCAGTACTCTCCCCAGTTTAAAATATCTCTATGTCCCCTTCAACAACCTAACTGGTTCTGTACCCCTGTCCCTGACGAACTGCACTCAATTGCAAGTGCTTGATCTCAGTTCTAATGCCTTCACGGGGACCTTTCCTCCTGGCTTCTGCTCTGATGCATCCCAGTCAGTCCTTGAGAAGATTCTCTTGGCCGACAATTTCCTCTCAGGGACAGTTCCCTTGGAGCTCGGAAACTGCCAGAAACTGAGGTCAATTGATCTTAGCTTCAACAACTTGAGTGGCCCAATTCCTTATGAAATTTGGACCCTACCAAATCTTTCTGATCTGGTTATGTGGGCAAACAACCTCACTGGTGAAATCCCAGAAGGCATTTGCATTAAGGGAGGAAATTTAGAGACCCTGATTCTCAACAACAATCGGATAAATGGAACTATTCCACTCTCCCTTGCCAACTGCACAAATTTGATATGGGTTTCACTTGCCAGCAACCAGCTTACCGGAGAAATCCCTGCTGGTATTGGAAATCTCCATAACCTTGCTGTCCTCCAATTGGGTAACAATACACTTAATGGACGGATCCCCTCAGAGCTTGGAAAGTGCCAAAATCTCATTTGGCTCGATTTAAACAGCAATGGTTTTAGTGGTTCAGTACCATCTGAGCTCGCCAGTGAAGCTGGCCTAGTCACGCCTGGACTTGTTTCAGGGAAGCAAATCTACTCTGGTGTAACGGTTTACACGTTTTCGAGCAATGGCAGCATGATCTACCTTGATCTCTCCTACAATTCCTTGTCGGGAACTATACCTCAAAGTTTTGGTTCTTTAAACTATTTGCAGGTCTTGAATTTGGGACACAACCAGCTAACTGGAAATATACCTGACAGCCTGGGAGGTTTGAAGGCAATTGGAGTCTTGGATCTCTCTCATAATAACCTTCAAGGATACATCCCCGGAGCACTAGGGTCTCTCTCATTTCTCAGTGATCTTGATGTGTCGAACAACAACCTCACTGGTCCAATCCCTTCTGGAGGGCAGTTGACCACTTTCCCAGCCTCCAGATATGATAACAATTCTGGCCTTTGCGGAGTTCCTTTACCCCCTTGTGGCTCTGATGCTGGAGATCACCCCCAGGCAAGCTCTTATAGTCGAAAAAGGAAACAGCAGGCTGTGGCTGCAGAAATGGTCATTGGCATCACCGTCTCACTTTTCTGTATCTTTGGCCTTACATTGGCTCTTTACAGGATGAGGAAGAACCAGCGGACGGAGGAACAGAGAGATAAATATATTGAAAGTCTTCCAACTTCTGCTGACTTTTGCCCATCTCCTTGA 2289 48.93 MKRGWRASWSEEHGVGLFCFLLLLMASDAKDLSDDDDDVVGLLAFKSSSVVSDPTGFLSDWSHDSPRPCAWRGVSCSSSGRVVALDLTNAGLVGSLQLSRLLALENLRHVHFHGNHFSEGDLSRLAFGPSLLQLDLSRNKISDSAFVDHFLSNCQNLNLFNLSDNKLAAKLSASSLSPCKNLSTLDLSYNLLSGEMPFGECGNLTVLDLSHNDFSGTDFPPSLRNCELLETLDLSHNVLEYKIPGDLLGNLRNLRWLSLAHNRFMGEIPPELAATCGTLQGLDLSANNLSGGFPLTFASCSSLVSLNLGNNRLSGDFLTMVISTLPSLKYLYVPFNNLTGSVPLSLTNCTQLQVLDLSSNAFTGTFPPGFCSDASQSVLEKILLADNFLSGTVPLELGNCQKLRSIDLSFNNLSGPIPYEIWTLPNLSDLVMWANNLTGEIPEGICIKGGNLETLILNNNRINGTIPLSLANCTNLIWVSLASNQLTGEIPAGIGNLHNLAVLQLGNNTLNGRIPSELGKCQNLIWLDLNSNGFSGSVPSELASEAGLVTPGLVSGKQIYSGVTVYTFSSNGSMIYLDLSYNSLSGTIPQSFGSLNYLQVLNLGHNQLTGNIPDSLGGLKAIGVLDLSHNNLQGYIPGALGSLSFLSDLDVSNNNLTGPIPSGGQLTTFPASRYDNNSGLCGVPLPPCGSDAGDHPQASSYSRKRKQQAVAAEMVIGITVSLFCIFGLTLALYRMRKNQRTEEQRDKYIESLPTSADFCPSP* 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 10675526 10680100 - Vvi19g795 Vvi19g795 782294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g795 762 Pfam Leucine rich repeat 598 656 IPR001611 GO:0005515
Vvi19g795 762 Pfam Leucine rich repeat 252 313 IPR001611 GO:0005515
Vvi19g795 762 SUPERFAMILY RNI-like 257 662 - -
Vvi19g795 762 SUPERFAMILY L domain-like 81 316 - -
Vvi19g795 762 Pfam Leucine Rich Repeat 576 595 IPR001611 GO:0005515
Vvi19g795 762 Gene3D Ribonuclease Inhibitor 30 695 IPR032675 -
Vvi19g795 762 PANTHER UNNAMED PRODUCT 17 145 - -
Vvi19g795 762 PANTHER UNNAMED PRODUCT 145 199 - -
Vvi19g795 762 PANTHER UNNAMED PRODUCT 561 758 - -
Vvi19g795 762 PANTHER UNNAMED PRODUCT 210 552 - -
Vvi19g795 762 SMART LRR_typ_2 595 618 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 643 666 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 201 226 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 619 642 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 424 448 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 104 129 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 325 348 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 349 373 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 251 275 IPR003591 -
Vvi19g795 762 SMART LRR_typ_2 497 521 IPR003591 -
Vvi19g795 762 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 145 199 - -
Vvi19g795 762 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 561 758 - -
Vvi19g795 762 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 17 145 - -
Vvi19g795 762 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 210 552 - -
Vvi19g795 762 MobiDBLite consensus disorder prediction 742 762 - -
Vvi19g795 762 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g795 - - vvi:100249741 1419.45