Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g799 ATGCTGGGTTCATTCAGTTCTTCCCATGAAGAAGAAGAGGACCCATCGGATCTGCAGTATCAGATTCCACAGCCATCACGTGCGTTCTCCCCTCCAGCAATCCAAATGCGGCAATTACTTATAAGTTGCGCCGAGCTTGTCTCCCAATCTGACTTCTCCGCCGCTCGCCGCCTCCTCTCCATCCTCTCCTCCAACTCCTCTCCTTTTGGTGACTCAACGGAGCGCTTGGTCCACCAATTTTCCGCTGCCCTCTCCCTCCGCCTCAGTCGCTATGCCACACCAGCTACTAGTAGTGGAGCCATGTCTGCTAGTGCTAATACTGCTGCTGCAGATTCTGAGGCGTTTCATTCCACGTATCTCTCCCTGAACCAAATAACCCCATTCATCAGGTTCAGTCAGCTCACTGCCAATCAAGCTATTCTGGAAGCCATTGAAGGGCAAAGGGCGATCCACATCCTGGACTTTGACATCATGCACGGGGTGCAATGGCCCCCTCTGATGCAGGCCATAGCTGAGCGTTGTGGCAACCTTCACCCTCCTCCCATGATCCGAATCACTGGAACTGGCGAAGATTTGGGTATACTCCAGAGAACTGGCGACCGCCTTCTGAAATTTGCGCAGTCCCTTGGTCTCAAATTCCAATTCCACCCACTTCTACTCCGCAATGACCCTACATCTGTGCCTCTCTATCTTCCCTCTGCGCTTCAACTACTCCCTGATGAAACTCTTGCAGTGAATTGTGTGCTTTATCTGCACAGGCTCCTCAAGGACGATTCCCGTGATCTACGCCTCTTCCTCCACAAAATCAAGGCCATGGAACCTAAGGTGGTGACCATCGCCGAGAGAGAAGCCAATCATAATCATCCACTTTTCTTGCAGAGATTCGTGGAGGCCTTGGACCACTACACAGCCGTGTTCGATTCTCTCGAGGCGACGCTGCCACCTACCAGTCGGGAGAGGCTGGCCGTTGAGCGAATATGGTTTGGAAGAGAAATCGTAGACATCGTGTCGGCAGAGGGAGACAACAGAAGGGAACGCCACGAGAGGTTCGAGTCGTGGGAGGTGATGCTGAGAAGCTCCGGCTTCTCAAACGTTCCCCTGAGCCCTTTTGCTCTGTCGCAGGCCAAGCTCCTCCTGAGGCTCCATTATCCTTCTGAAGGTTACCGGCTGCAGATTATCAACGATTCTTTCTTCCTAGGTTGGCAAAATCAAGCTCTTTTCTCCGTTTCTTCATGGCACTAA 1242 52.42 MLGSFSSSHEEEEDPSDLQYQIPQPSRAFSPPAIQMRQLLISCAELVSQSDFSAARRLLSILSSNSSPFGDSTERLVHQFSAALSLRLSRYATPATSSGAMSASANTAAADSEAFHSTYLSLNQITPFIRFSQLTANQAILEAIEGQRAIHILDFDIMHGVQWPPLMQAIAERCGNLHPPPMIRITGTGEDLGILQRTGDRLLKFAQSLGLKFQFHPLLLRNDPTSVPLYLPSALQLLPDETLAVNCVLYLHRLLKDDSRDLRLFLHKIKAMEPKVVTIAEREANHNHPLFLQRFVEALDHYTAVFDSLEATLPPTSRERLAVERIWFGREIVDIVSAEGDNRRERHERFESWEVMLRSSGFSNVPLSPFALSQAKLLLRLHYPSEGYRLQIINDSFFLGWQNQALFSVSSWH* 414
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 10747970 10749212 + Vvi19g799 Vvi19g799 782298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g799 413 MobiDBLite consensus disorder prediction 1 27 - -
Vvi19g799 413 PANTHER SCARECROW-LIKE PROTEIN 18 9 413 IPR030017 GO:0005634|GO:0010223
Vvi19g799 413 ProSiteProfiles GRAS family profile. 27 413 IPR005202 -
Vvi19g799 413 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 413 IPR005202 -
Vvi19g799 413 Pfam GRAS domain family 36 412 IPR005202 -
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14446 PF03514 GRAS 3.90E-127 CL0063 Vvi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g799 - - vvi:100261722 763.066