Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g8 ATGGCTAAAGCAGCTGCTCTCTCTCTCTTTCTCCTGCTTTTGTCCTTCATTTCAGGAGGAACTTTGAAAATGGTGAATGGAGAGAAAACTTGGTGTGTGGCCAAGCCATCATCCGATCAGGCTACTCTTTTAGCCAACATCAATTATGCATGTTCACAAGTAGATTGCCAGGTTCTGCAGAGGGGCTGCCCTTGCTTCTCCCCAGATAATCTCATGAACCATGCCTCAATAGCCATGAATCTTTACTACCAGTCAAGGGGAAGGAACCACTGGAACTGCTATTTTCAGAACTCTGCCGTCATTGTCATGACCGATCCAAGTTATGGCAGCTGCACCTATGCGTAA 345 46.38 MAKAAALSLFLLLLSFISGGTLKMVNGEKTWCVAKPSSDQATLLANINYACSQVDCQVLQRGCPCFSPDNLMNHASIAMNLYYQSRGRNHWNCYFQNSAVIVMTDPSYGSCTYA* 115
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 75852 77852 - Vvi19g8 Vvi19g8 781507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g8 114 Pfam X8 domain 30 99 IPR012946 -
Vvi19g8 114 Gene3D - 23 113 - -
Vvi19g8 114 PANTHER BETA-1,3 GLUCANASE 7 113 IPR044788 -
Vvi19g8 114 PANTHER GLUCAN ENDO-1,3-BETA-D-GLUCOSIDASE-LIKE 7 113 - -
Vvi19g8 114 SMART X8_cls 30 113 IPR012946 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g305 Vvi19g8 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g8 - - vvi:100257244 222.246