Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g815 ATGAAGCTCAGCTCAGTTGCAATTTCTTTTGGGTTCCTTACTGTGCTAATAAGCTGTGTATGGAGGCTGCTGAATTGGGTGTGGTTGAGACCGAAGAGGTTAGAGAGATGCCTTAGAGAGCAAGGCCTGGCTGGGAATTCGTATAGGCTATTACAAGGGGACTCCAAAGAGATGTCCAGGATGATGAAGGAAGCATATTCAAGACCCATCAGCCTCTCCGATGATATTGTTCAGCGTGTTCTGCCCTTCCATTGTCATTTCATTAAGAAATATGGTAAAAATTTCTTTACATGGGTGGGTCCAAGTCCAAGGGTAAACATTATGGAGCCTGAGCTAATGAGGGATGTTTTGTTGAAGTCCAATATCTTTCAAAAGACACCCTCACACCCGTTGGTCAAGTTGCTGGTTTCTGGTCTAGTGGCCTTGGAAGGTGAACAATGGGCCAAACGTAGAAAGATCATCAACCCAGCTTTCCATCCAGAAAAGTTGAAGAATATGTTATCGGCATTTCATTTGAGTTGTAGCGACATGGTGAACAAATGGAAGAAGCTTTCGGTGGAGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGCAGTAGCTACGAAGAAGGAATAAGGATATTCCAACTCCAGAAAGAACAGACATATCTTGCAATCAAGGTTGCAATGTCAGTTTATATCCCAGGATGGAGGTTTTTTCCCACAAAGACGAACAAGAGGATGAAGCAAATAAGCAAAGAAGTACATGCATTGTTGGGGGGCATCATCAACAAAAGGGAGAAGGCAATGGAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATATTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACACGAAGATTGGAATGAGTGCCAAAGATGTCATTGATGAATGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTTTATGGACAATGGTCCTGCTAAGCCAACATCCAGACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAACAAACCTGAAAATGATGGCTTAAACCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATATCCACCAGTAACAGTGCTTACCAGAATGGTTTCTAAGGACACTCAAGTGGGAGACATGTATTTTCCAGCCGGAGTGCAGGTCTCTTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGAGACGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCTGAAGGAGTTTCAAAGGCAACAAAAAACCAAGTTTCATTTTTACCATTCGGTTGGGGTCCTCGGGTGTGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTACAACGCTTCTCATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTACAGTCTTATAACTATCCAACCCCAATATGGTGCACACCTGATTCTACGTGGACTTTATATCAATAGAAATAAAAGAGAACAAATATATCTATTGACAGTCATTTCTTCTTTCTGCAGATTTTGCTTCATTCCAATATCTTGGGGTGTTAAAACATCCATATAA 1653 41.38 MKLSSVAISFGFLTVLISCVWRLLNWVWLRPKRLERCLREQGLAGNSYRLLQGDSKEMSRMMKEAYSRPISLSDDIVQRVLPFHCHFIKKYGKNFFTWVGPSPRVNIMEPELMRDVLLKSNIFQKTPSHPLVKLLVSGLVALEGEQWAKRRKIINPAFHPEKLKNMLSAFHLSCSDMVNKWKKLSVEGSCELDVWPYLENLTGDVISRTAFGSSYEEGIRIFQLQKEQTYLAIKVAMSVYIPGWRFFPTKTNKRMKQISKEVHALLGGIINKREKAMEAGETANSDLLGILMESNFREIQEHQNNTKIGMSAKDVIDECKLFYLAGQETTSVLLLWTMVLLSQHPDWQARAREEVLQVFGNNKPENDGLNHLKIVTMIFHEVLRLYPPVTVLTRMVSKDTQVGDMYFPAGVQVSLPTILVHHDHEIWGDDAKEFNPERFAEGVSKATKNQVSFLPFGWGPRVCIGQNFAMMEAKIALAMILQRFSFELSPSYAHAPYSLITIQPQYGAHLILRGLYINRNKREQIYLLTVISSFCRFCFIPISWGVKTSI* 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 11317429 11332874 - Vvi19g815 Vvi19g815 782314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g815 550 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi19g815 550 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 SUPERFAMILY Cytochrome P450 78 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi19g815 550 PANTHER CYTOCHROME 10 513 - -
Vvi19g815 550 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 513 - -
Vvi19g815 550 Gene3D Cytochrome P450 63 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g815 550 Pfam Cytochrome P450 85 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g815 - - vvi:100255558 1044.26