Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g817 ATGTCATTGAAGAGTGTAAGCTATTCTATCTATCTTGCTGGCCAAAAGACAACCTCAGTTTTGCTTGTATGGACAATGGCCCTGCTAAGCGAGCATCCAAACTGGCAAGCTCATGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAATGGGAAGTTGATGGATTAAATCACCTAAAAATTGCCACCATGATTTTTCATAAGGTTCTTAGGTTATACCCACTAGTAGCAATGCTTCCTAGAGTTGTTTATAAGGACACTCAAGTGGGAGACATGTGTTTTCCAGCTGGAGTGCAGGTCTTGTTGTCCACCATCCTAGTTCACCATGATCATGAAATTTTGGGGGATGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCAGAAGGAGTTTTGAAGGCAACAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCGGGTATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTATAA 510 40.39 MSLKSVSYSIYLAGQKTTSVLLVWTMALLSEHPNWQAHAREEVLQVFGNKKWEVDGLNHLKIATMIFHKVLRLYPLVAMLPRVVYKDTQVGDMCFPAGVQVLLSTILVHHDHEILGDDAKEFNPERFAEGVLKATKNQVSFFPFGWGPRVCIGQNFAMMEAKIALAMIL* 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 11363439 11365290 - Vvi19g817 Vvi19g817 782316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g817 169 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 169 - -
Vvi19g817 169 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS P450 superfamily signature 65 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS P450 superfamily signature 142 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS P450 superfamily signature 151 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 144 153 IPR017972 GO:0005506|GO:0016705
Vvi19g817 169 Gene3D Cytochrome P450 2 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PANTHER CYTOCHROME P450 72A11-RELATED 11 169 - -
Vvi19g817 169 Pfam Cytochrome P450 8 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 SUPERFAMILY Cytochrome P450 4 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS E-class P450 group I signature 2 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS E-class P450 group I signature 22 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS E-class P450 group I signature 105 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS E-class P450 group I signature 141 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g817 169 PRINTS E-class P450 group I signature 151 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g817 - - vvi:100265207 295.819