Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g821 ATGGAGCCTGAGCTAATGAGGGATGTTTTGTTGAAGTCCAATATCTTTCAAAAGACACCCTCACACCCGTTGGTCAAGTTGCTGGTTTCTGGTCTAGTGGTTTTGGAAGGTGAACAATGGGCCAAACGTAGAAAGATGATCAACCCAGTTTTCCATCCAGAAAAGTTGAAGAATATGTTACCGGCATTTCATTTGAGTTGTAGCGACATGTTGAACAAATGGAAGAAGCTTTCGGTGAAGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGCAGTAGCTACGAAGAAGGAAGAAGGATATTCCAACTCCAGAAAGAACAGACATATCTTGCAATCAAGGTTGCAATGTCAGTTTATATCCCAGGATGGAGGTTTTTTCCCACAAAGACGAACAAGAGGATGAAGCAAATAAGCAAAGAAGTACATGCATTGTTGGGGGGCATCATCAACAAAAGGGAGAAGGCAATGGAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATATTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACACGAAGATTGGAATGAGTGCCAAAGATGTCATTGATGAATGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTTTATGGACAATGGTCCTGCTAAGCCAACATACAGACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAACAAACCTGAAAATGATGGCTTAAACCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATATCCACCAGTAACAGTGCTTACCAGAATGGTTTCTAAGGACACTCAAGTGGGAGACATGTATTTTCCAGCCGGAGTGCAGGTCTCTTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGAGACGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCTGAAGGAGTTTCAAAGGCAACAAAAAACCAAGTTTCATTTTTACCATTCGGTTGGGGTCCTCGGGTGTGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAACAGCTTTGGCAATGATCTTACAACGCTTCTCATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTTCAGTCTTATAACTATCCAACCCCAATATGGTGCACACCTGATTCTACGTGGACTTTAA 1227 41.48 MEPELMRDVLLKSNIFQKTPSHPLVKLLVSGLVVLEGEQWAKRRKMINPVFHPEKLKNMLPAFHLSCSDMLNKWKKLSVKGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIFQLQKEQTYLAIKVAMSVYIPGWRFFPTKTNKRMKQISKEVHALLGGIINKREKAMEAGETANSDLLGILMESNFREIQEHQNNTKIGMSAKDVIDECKLFYLAGQETTSVLLLWTMVLLSQHTDWQARAREEVLQVFGNNKPENDGLNHLKIVTMIFHEVLRLYPPVTVLTRMVSKDTQVGDMYFPAGVQVSLPTILVHHDHEIWGDDAKEFNPERFAEGVSKATKNQVSFLPFGWGPRVCIGQNFAMMEAKTALAMILQRFSFELSPSYAHAPFSLITIQPQYGAHLILRGL* 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 11491790 11505091 - Vvi19g821 Vvi19g821 782320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g821 408 PANTHER CYTOCHROME P450 72A11-RELATED 1 399 - -
Vvi19g821 408 Gene3D Cytochrome P450 1 406 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS P450 superfamily signature 218 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS P450 superfamily signature 270 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS P450 superfamily signature 347 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 399 - -
Vvi19g821 408 PRINTS E-class P450 group I signature 94 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS E-class P450 group I signature 207 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS E-class P450 group I signature 227 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS E-class P450 group I signature 310 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS E-class P450 group I signature 346 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 PRINTS E-class P450 group I signature 356 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 Pfam Cytochrome P450 2 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g821 408 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 349 358 IPR017972 GO:0005506|GO:0016705
Vvi19g821 408 SUPERFAMILY Cytochrome P450 2 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g821 - - vvi:100260010 815.453