Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g832 ATGAGTGTCAAAGAGGTCATTGAAGAGTGTAAGATATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTTCTTGTATGGACAATGGTCCTGCTAAGCGAGAATCCAAATTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAACTGGAAGCTAATGGATTAAATCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAGTAGCAATGCTTACTAGAGCTGTTTATAAGGACACTCAAGTGGGAGACATGTATTTTCCAGCTGGAGTGCAGGTTGCGTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGAGATGATGTAAAGGAGTTTAACCCAGAGAGGCTTGCAGAAGGAATTTCGAAGGCAAAAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCAGGCATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTACAACACTTCTTATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTTCAATATCCTAACTATGCAACTCCAATATGGTGGACACCTGATTCTACATGGACTTCAGTGTTGA 627 40.51 MSVKEVIEECKIFYLAGQETTSVFLVWTMVLLSENPNWQARAREEVLQVFGNKKLEANGLNHLKIVTMIFHEVLRLYPPVAMLTRAVYKDTQVGDMYFPAGVQVALPTILVHHDHEIWGDDVKEFNPERLAEGISKAKKNQVSFFPFGWGPQACIGQNFAMMEAKIALAMILQHFLFELSPSYAHAPFNILTMQLQYGGHLILHGLQC* 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 11929906 11931235 - Vvi19g832 Vvi19g832 782331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g832 208 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 Gene3D Cytochrome P450 1 205 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 197 - -
Vvi19g832 208 PANTHER CYTOCHROME P450 72A11-RELATED 1 197 - -
Vvi19g832 208 Pfam Cytochrome P450 1 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 SUPERFAMILY Cytochrome P450 1 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS E-class P450 group I signature 67 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g832 208 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g832 - - vvi:100265207 385.571