Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g834 ATGAAGCAAATAAGCAAAGAAGTATATGCATTGTTGAGGGGTATCGTTAACAAAAGAGAGAAGGCAATGAAGGTTGGCGAAACTACTAATAGTGACTTATTAGGTATGCTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACAAGAAGATTAGAATCAGTCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAATGGGAAGCTGATGGATTAAATCACCTAAAAATTGTCACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAATAGCAATGCTTCCTAGAGTTGTTTATAAGGACACTCAAGTGGGAGACATGTGTTTTCCAACTGGATTGCAGGTCGTGTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGGGATGATGCAAAGGAGTTTAATCCAAAGAGGTTTGTAGAAGGAGTTTTAAAGGTAACAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCGGGTATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTATAA 576 37.33 MKQISKEVYALLRGIVNKREKAMKVGETTNSDLLGMLMESNFREIQEHQNNKKIRISQARAREEVLQVFGNKKWEADGLNHLKIVTMIFHEVLRLYPPIAMLPRVVYKDTQVGDMCFPTGLQVVLPTILVHHDHEIWGDDAKEFNPKRFVEGVLKVTKNQVSFFPFGWGPRVCIGQNFAMMEAKIALAMIL* 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 12089403 12090697 - Vvi19g834 Vvi19g834 782333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g834 191 Gene3D Cytochrome P450 55 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PANTHER CYTOCHROME P450 72A11-RELATED 1 51 - -
Vvi19g834 191 PANTHER CYTOCHROME P450 72A11-RELATED 58 191 - -
Vvi19g834 191 SUPERFAMILY Cytochrome P450 2 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PRINTS P450 superfamily signature 164 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PRINTS P450 superfamily signature 173 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 Pfam Cytochrome P450 58 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 166 175 IPR017972 GO:0005506|GO:0016705
Vvi19g834 191 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 51 - -
Vvi19g834 191 PANTHER CYTOCHROME P450 FAMILY MEMBER 58 191 - -
Vvi19g834 191 PRINTS E-class P450 group IV signature 82 98 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PRINTS E-class P450 group IV signature 132 150 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PRINTS E-class P450 group IV signature 157 173 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g834 191 PRINTS E-class P450 group IV signature 173 191 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g834 - - vvi:100265207 342.043