Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g841 ATGACTGATTACTTTTCATCATATTGTTTGTTATCTGCTCTTCTCTTCCTAACTATTTTTCTTTTCCTTTCTGTTTTCATAGAAACTATGGTTGAACCTGAGCTAATAAGGGATGTTTTGTTAAAGTCCAATGTCTTTCAAAAGCCACCCCCACACCCACTTGGCAAGTTGCTGGTTTCTGGTCTGGTGACCTTGGAAGGCGAACGATGGGCTAAACGTAGAAAGATCATCAACCCAGCTTTCCATCTAGAAAAGTTGAAGAATATGTTGCCGGCATTTCATTTGAGTTGTAGCGACATGGTGACCAAATGGAAAATGCTTTCAGTGGGGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGTAGTAGCTATGAAGAAGGAAGAAGGATATTCCAGCTCCAGAAAGAACAAACACATCTTGCAATCCAGGTTACAATGTCAGTTTATATCCCGGGATGGAGGTTTTTACCCACAAAGACGAACAGGAGGATGAAGCAAATAAGCAAAGAAGTATATGCATTGTTGAGGGGTATCATTAACAAAAGGGAGAAGGCAATGAAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATACTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACAAGAAGATTAGAATGAGTGTCAAAGATGTCATTGAAGAGTGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTGTATGGACAATGGTCCTGCTAAGCGAGCATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAACCAGAAGCTGCTGGATTAAATCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAGTAGCAATGCTTGCTAGAGCTGTTTATAAGGATACTCAAGTGGGAGACATGTGTTTTCCAGCTGGAGTGCAGGTCGTGTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGGGATGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCAGAAGGAGTTTTGAAGGCAACAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCGGGTATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTACAACACTTCTCATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTTTAGTATCCTAACTATGCAACCCCAATATGGTGCACACCTGATTCTACGTGGACTTCAGTGTTGA 1323 40.82 MTDYFSSYCLLSALLFLTIFLFLSVFIETMVEPELIRDVLLKSNVFQKPPPHPLGKLLVSGLVTLEGERWAKRRKIINPAFHLEKLKNMLPAFHLSCSDMVTKWKMLSVGGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIFQLQKEQTHLAIQVTMSVYIPGWRFLPTKTNRRMKQISKEVYALLRGIINKREKAMKAGETANSDLLGILMESNFREIQEHQNNKKIRMSVKDVIEECKLFYLAGQETTSVLLVWTMVLLSEHPNWQARAREEVLQVFGNKKPEAAGLNHLKIVTMIFHEVLRLYPPVAMLARAVYKDTQVGDMCFPAGVQVVLPTILVHHDHEIWGDDAKEFNPERFAEGVLKATKNQVSFFPFGWGPRVCIGQNFAMMEAKIALAMILQHFSFELSPSYAHAPFSILTMQPQYGAHLILRGLQC* 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 12274775 12280143 - Vvi19g841 Vvi19g841 782340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g841 440 Gene3D Cytochrome P450 20 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 SUPERFAMILY Cytochrome P450 24 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 379 388 IPR017972 GO:0005506|GO:0016705
Vvi19g841 440 Pfam Cytochrome P450 30 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 429 - -
Vvi19g841 440 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS E-class P450 group I signature 237 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS E-class P450 group I signature 257 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS E-class P450 group I signature 299 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS E-class P450 group I signature 340 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS E-class P450 group I signature 376 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS E-class P450 group I signature 386 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS P450 superfamily signature 248 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS P450 superfamily signature 377 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g841 440 PANTHER CYTOCHROME P450 72A11-RELATED 30 429 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g841 - - vvi:100265207 831.247