Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g845 ATGAAGCTCAGTTCAGTTGCAATTTCCTTTGCTTTTATTACTCTCCTAATATATGCATGGAGATTATTGAATTCGGTGTGGTTGAAACCAAAGAAGATAGAGAGGTACCTTAGGCAACAAGGTCTGATTGGAAATTCCTACAGATTGTTACATGGGGATTTTAGAGAGATGTCAAGGATGATTGACGAAGCAAATTCAAGACCCATCAGCTTATCTGATGATATTGTGCAGCGAGTTCTACCCTTCCATTATCATTCCATTAAGAAATATGGTAAAAATTGTTTTATATGGATGGGCCCAAAACCAGTGGTCAACATTATGGAGCCTGAGCTGATAAGGGATGTTCTCTTAAAGCATAATGCCTTTCAAAAACCACCTGTGCACCCGCTTGGCAAGCTGCTGGCTACTGGTGTTATTGCACTAGAAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGTTGAAGCACATGGTACCCGCATTCCAATTGAGTTGTAGTGAAATGGTAAATAAATGGGAGAAGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAAAATTTGGCGGGAGATGTGATTTCTAGAACTGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCCAGGTTTCGCAGTCAATATATATTCCGGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATGAGGCAAATTAGCAATGAAGTCAATGCATTGTTAAAAGGTATCATTGAGAGAAGAGAGAAGGCAATGAAGGTTGGTGAAACTGCTAATGATGATTTATTAGGTCTACTGATGGAATCCAACTACAAAGAAATGCAAGAACATGGTGAAAGGAAGAATGTTGGAATGAGCAACAAGGATGTCATCGAGGAGTGTAAGCTATTCTACTTCGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACAATGGTTCTATTAAGCAAGCATTCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAAGTTTTTGGCAATAAAAAACCAGATGGTGATGGTTTAAATCACCTTAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGCATCCATGCTTATTCGATCTGTTTATGCTGACACCGAAGTGGGAGGAATGTATTTACCAGACGGAGTGCAGGTCTCATTGCCAATCCTCCTACTTCATCATGACCATGAAATTTGGGGAGACGACGCAAAAGATTTCAACCCGGAGAGATTTTCTGAAGGAGTTTCAAAGGCAACAAAGGGCCAATTTGCCTTTTTTCCATTTGGTTATGGTCCTCGGGTACCTTTGAACCTAGCTAGTGTCGAATTTAAATTTTCCTTTGTTGATCATGTATGGTTTGTCGTGGGGATTGTATCGAAAATTTTGATTGTTTCAAAATTAGTGATGTTTTTTTTTTCATTTTTCTCTTCATAG 1518 39.86 MKLSSVAISFAFITLLIYAWRLLNSVWLKPKKIERYLRQQGLIGNSYRLLHGDFREMSRMIDEANSRPISLSDDIVQRVLPFHYHSIKKYGKNCFIWMGPKPVVNIMEPELIRDVLLKHNAFQKPPVHPLGKLLATGVIALEGEQWTKRRKIINPAFHLEKLKHMVPAFQLSCSEMVNKWEKKLSKDGSCELDIWPDLENLAGDVISRTAFGSSYEEGRRIFQLQKEQAHLAVQVSQSIYIPGWRFVPTKTNKRMRQISNEVNALLKGIIERREKAMKVGETANDDLLGLLMESNYKEMQEHGERKNVGMSNKDVIEECKLFYFAGQETTSVLLLWTMVLLSKHSNWQARAREEVLQVFGNKKPDGDGLNHLKIVTMIFHEVLRLYPPASMLIRSVYADTEVGGMYLPDGVQVSLPILLLHHDHEIWGDDAKDFNPERFSEGVSKATKGQFAFFPFGYGPRVPLNLASVEFKFSFVDHVWFVVGIVSKILIVSKLVMFFFSFFSS* 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 12496228 12500010 - Vvi19g845 Vvi19g845 782344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g845 505 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 475 - -
Vvi19g845 505 Pfam Cytochrome P450 88 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 SUPERFAMILY Cytochrome P450 78 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g845 505 PANTHER CYTOCHROME 11 475 - -
Vvi19g845 505 Gene3D Cytochrome P450 29 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g845 - - vvi:100263459 941.414