Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g847 ATGGTTCTATTAAGCAAACATTCAAACTGGCAAGCTTGCGCAAGGGAAGAGGTTTTACGGGTTTTTGGTAATAAAAAACCAGATGGCGATGACTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGCACCCATGCTCACACGAGCTGTTTTTGCCGACAGCCAAGTGGGAGGATTGTATTTACCAGATGGAGTGCAGATCGCTTTGCCAATCCTCCTAATTCACCACGATGATAAAATTTGGGGAGACGATGCAAAGGAATTCAACCCGGGGAGATTTTCAGAAGGAGTTTCAAAGGCAGCAAAGAGCCAAGTTTCATTTTTTCCATTTGGTTATGGTCCTCGGATATGCGTTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAACGTTTCTCATTTGAACTTTCCCCATCCTATGCTCATGCACCTATTAGTCTTACAACTATGCAACCCCAACATGGTGCACACCTGATTTTACATGGACTTTAG 537 41.71 MVLLSKHSNWQACAREEVLRVFGNKKPDGDDLNHLKIVTMIFHEVLRLYPPAPMLTRAVFADSQVGGLYLPDGVQIALPILLIHHDDKIWGDDAKEFNPGRFSEGVSKAAKSQVSFFPFGYGPRICVGQNFAMMEAKMALAMILQRFSFELSPSYAHAPISLTTMQPQHGAHLILHGL* 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 12661107 12663417 + Vvi19g847 Vvi19g847 782346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g847 178 PANTHER CYTOCHROME P450 72A11-RELATED 1 169 - -
Vvi19g847 178 Gene3D Cytochrome P450 1 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 169 - -
Vvi19g847 178 SUPERFAMILY Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS P450 superfamily signature 40 51 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS P450 superfamily signature 117 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS P450 superfamily signature 126 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 Pfam Cytochrome P450 2 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS E-class P450 group I signature 39 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS E-class P450 group I signature 80 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS E-class P450 group I signature 116 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 PRINTS E-class P450 group I signature 126 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g847 178 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 119 128 IPR017972 GO:0005506|GO:0016705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g847 - - vvi:100256575 366.311