Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g85 | ATGGGCACAGGGAACCAAATTGAACACGAAGCTTTCCTCTCCATGTGGGTTTCAAGGTTTGTTCTTCCTACAAAGTCAAATTCCACCATTGAAAAGCATGTATTTTCCATAGCGATTAGACTAGCTAGAGGGATCCCAGTTGCCCTTGGGCCTGCTGTCTTAGTAAGCATTTACCGGGATTTGAGCTTGTTGAAACAGACTACTGTGGCTCTAACCAAAATGGGAAACAATGAGAAGAAAGACAATGTCTTTGCCCTGTCACTTCTGGCCCCTCTTCGGTTTGTCCAGGTTTGGGTATGGGAGAGGTTTCCGGCTTTGAGACCACAGCCAAAACCAAAGGAATTGGGGGAACCCAGGCTTGCTCGATGGCACAAAATGAAGGGTCAAAGGGAAGAGTGGGTGCTGGTGGGCTCTGGCCTGGACCAAGAGTTGCAGGCCTTTGCTCGGTTCTTGAGGGTCTGCAAGCTGGTTGGAGTTGATGACTCTATGGAATGGTACTTCCCACATCGGGTGGGAATGCAATTTGGAATGGATCAAGATCTTCCGGGTTATGTTCACCCTTGTAATGGGACTCCTGAAGTTGCTTGGAACAATTATAGCAAACCCATTAATGGTGTGAAGTTGTACATTCCATCCCGGTTCTTTGAGGCAGATGTTACCACCAGATACCTGGAGTGGTGGAATCCATTACTAAAGAAGGAAGGTGATGATGCCCTTGTTCCTCCTGGTTTTCCTGCAAAACATAATTGGGTGGATGCAGGAGAAGGCAATGATGCCCTCGATCATTCTGGTTTTTGTGCAAAACATAGTAGGATGGATGCAGGAGATTCTAGTGATGAAGATAGAATGACAGTTGGAGCGATGTTGAAGTCCATTAGAAACCTTAAATGTGTTGGGAAGAATTCAGCGACTCCATCATTGTCAACCTCCAAGACCGGAGGTGTAAGAAATGAGTCACTGATAAATTGTGTAAATAATATTTTTCAAGGTGTAGCTGCATCAGAAAAAACCATAGAAAATGCAAATGAGAGCAGTGAGAGAACTACAGCTATGGCAGGAGGATTGGGAAGAGCCAGAGAAGATGCCAATAGGAATAATTCAGAGAGTGCGGCTATGGTGGGAGGGGCAGAGGAAGCGATGGAAAAAGAAAATGAGAGTAATGTGGGGAGTCCAGTTATGGTGGGAGAATCAGAAAAGGCCATGGAAGATGCAATCAGGAGTAGTGAAAAGAATGCGGCAACGATGAGTGGATTAGAGAAAGCCATAGAAGATGCAAATAAGATAAAGGAGAAGAGAGTGATGAGTGGCATTGGTACTATTGAGATCCCGGGACTGGATCTTGAAGCTCGAATATGCAAGCTTGAGAGGGTGAGGGATCCAGTTGCGCTTGCCCCTGCAGTTTTAGCAGGCATTTACAGGGATTTAAGTTTGAGACCGAAGAGAAGGAAGATGGGCTGCTTCGCTTGTTGCATGTCTGATCCAAATGTTGGCAGTAAGTCATTGAAGAAGAGCATTAAGGAGTATGGTGACGCCAAAAGATTAGCCTCATTCGTTAACATCTCCTTCAAATCCGATGGCAGCAAGAGAAGATACATAGCAGAAGAGATAGCAAAAATGGGCAAAGGTAGTATTCCTGCCCATGTCTTCACAATAGGTGAGCTCTCAGCTGCAACCAACAACTTCAACCATGAGGCTTTGATCGGAGAAGGCGGCTTTGGGAGGGTGTACAAAGGCCATGTAGAGAAGACAAATAATAGTGTTGCTGTTAAGAGACTAGACAGGAATGGGTTCCAAGGCAACAGAGAGTTCCTTGTAGAGGTTTTCATGTTGAGTCTTCTTCACCATACTAATCTCGTGAACATGGTCGGATATTGCTGTGATGGTGATCAAAGGATTTTGGTTTATGAGTACATGGCCAATGGTTCCTTGGAGGATCACCTTCTCGATTTGGCTCCAAACAAGAAGCCTCTGGACTGGAAGACCAGGATGAAAATCGCTGAAGGAGCAGCGAGAGGGCTCGAATACTTGCATGACACAGCCAATCCCCCGGTCATTTACCGAGACTTCAAAGCATCCAACATACTATTGGATGAGGATTTCAATCCAAAGCTCTCCGATTTTGGCCTTGCCAAGCTCGGCCCGACCGGAGACAAGACTCATGTGTCCACAAGAGTGATGGGGACTTACGGCTACTGCGCGCCTGAGTATGCACTTACAGGCCAGTTGACGACAATGTCCGATGTATACAGCTTCGGCGTCGTGCTCTTGGAGATCATCACAGGAAGAAGAGTGATCGATAATTCTAGACCGACTGAGGAGCAAAATCTTGTCACTTGGGCACAACCATTGCTTAAAGACAGAAGGAAGTTTACTCTCATGGCCGACCCCCTCCTAGAAGGAAACTACCCCATAAAGGGTCTCTACCAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCCACCATCAGGCCCTTGATGAGCGATGTGGTAATGGCCCTCGAGTACCTGTCTGACAAGAGGGCTGCAGGTGTTGATGGAGATGAAGAAGACGAGGATACCAACAAGAATGAAGATGAGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATTAAGGACACAACTTCATCTGATAGAAACAGAAGTGGAGGTATTGAGACTGATCATGATGAGGACAATGGTGAATCCAATGGAAAGACAACGAAAAAGGAGGAAGATATTCAGTGA | 2736 | 46.16 | MGTGNQIEHEAFLSMWVSRFVLPTKSNSTIEKHVFSIAIRLARGIPVALGPAVLVSIYRDLSLLKQTTVALTKMGNNEKKDNVFALSLLAPLRFVQVWVWERFPALRPQPKPKELGEPRLARWHKMKGQREEWVLVGSGLDQELQAFARFLRVCKLVGVDDSMEWYFPHRVGMQFGMDQDLPGYVHPCNGTPEVAWNNYSKPINGVKLYIPSRFFEADVTTRYLEWWNPLLKKEGDDALVPPGFPAKHNWVDAGEGNDALDHSGFCAKHSRMDAGDSSDEDRMTVGAMLKSIRNLKCVGKNSATPSLSTSKTGGVRNESLINCVNNIFQGVAASEKTIENANESSERTTAMAGGLGRAREDANRNNSESAAMVGGAEEAMEKENESNVGSPVMVGESEKAMEDAIRSSEKNAATMSGLEKAIEDANKIKEKRVMSGIGTIEIPGLDLEARICKLERVRDPVALAPAVLAGIYRDLSLRPKRRKMGCFACCMSDPNVGSKSLKKSIKEYGDAKRLASFVNISFKSDGSKRRYIAEEIAKMGKGSIPAHVFTIGELSAATNNFNHEALIGEGGFGRVYKGHVEKTNNSVAVKRLDRNGFQGNREFLVEVFMLSLLHHTNLVNMVGYCCDGDQRILVYEYMANGSLEDHLLDLAPNKKPLDWKTRMKIAEGAARGLEYLHDTANPPVIYRDFKASNILLDEDFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYALTGQLTTMSDVYSFGVVLLEIITGRRVIDNSRPTEEQNLVTWAQPLLKDRRKFTLMADPLLEGNYPIKGLYQALAVAAMCLQEEATIRPLMSDVVMALEYLSDKRAAGVDGDEEDEDTNKNEDEGEEEEEEEEEEEIKDTTSSDRNRSGGIETDHDEDNGESNGKTTKKEEDIQ* | 912 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 968092 | 977755 | + | Vvi19g85 | Vvi19g85 | 781584 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g85 | 911 | PANTHER | SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE | 484 | 862 | - | - | |
Vvi19g85 | 911 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 684 | 696 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi19g85 | 911 | Gene3D | Transferase(Phosphotransferase) domain 1 | 638 | 864 | - | - | |
Vvi19g85 | 911 | ProSitePatterns | Protein kinases ATP-binding region signature. | 567 | 590 | IPR017441 | GO:0005524 | |
Vvi19g85 | 911 | Pfam | Plant mobile domain | 2 | 128 | IPR019557 | - | |
Vvi19g85 | 911 | Pfam | Plant mobile domain | 129 | 228 | IPR019557 | - | |
Vvi19g85 | 911 | MobiDBLite | consensus disorder prediction | 354 | 390 | - | - | |
Vvi19g85 | 911 | Gene3D | Phosphorylase Kinase; domain 1 | 523 | 637 | - | - | |
Vvi19g85 | 911 | MobiDBLite | consensus disorder prediction | 876 | 911 | - | - | |
Vvi19g85 | 911 | MobiDBLite | consensus disorder prediction | 849 | 875 | - | - | |
Vvi19g85 | 911 | Coils | Coil | 857 | 877 | - | - | |
Vvi19g85 | 911 | PANTHER | OS07G0668900 PROTEIN | 484 | 862 | - | - | |
Vvi19g85 | 911 | MobiDBLite | consensus disorder prediction | 843 | 911 | - | - | |
Vvi19g85 | 911 | Pfam | Protein kinase domain | 562 | 775 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g85 | 911 | ProSiteProfiles | Protein kinase domain profile. | 561 | 838 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g85 | 911 | CDD | STKc_IRAK | 567 | 836 | - | - | |
Vvi19g85 | 911 | SUPERFAMILY | Protein kinase-like (PK-like) | 543 | 837 | IPR011009 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76481 | PF00069 | Pkinase | 7.80E-45 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g85 | - | - | vvi:104877488 | 895.575 |