Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g852 ATGATTAACGAAGCAAATTCCAGACCCATCAGCTTCTCTGATGATATTGTGCAGCGAGTTCTACCATTTCACGATCATTCCATCCAGAAATATGGTAAAAATAGTTTTACATGGTTGGGCCCAAAACCAGTGGTAAACATTATGGAGCCTGAGCTGATAAGGGATGTTTTCTTAAAGCACAATGCCTTCCAAAAAGTACCGCCACACCCTCTCGGCAAGCTGCTGGCCACTGGTGTTGTTGCATTGGAAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAGAAGTTGAAGCACATGGTATCGGCATTCCAATTGAGTTGTAGTGATATGGTCAATAAATGGGAGAAGAAGCTCTCCCTGGACGGCTCATGTGAATTGGACGTTTGGCCCTATCTTGAAAATTTGGCGGGAGATGTGATTTCTAGAACTGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTTCAGAGAGAGCAAGCACATCTTGCAATCCAGGTTACTCGGTCAATCTATGTTCCCGGATGGAGGTTTTTCCCAACAAAGACAAACAGGAGAATGAGGCAAATTAGCAATGAAGTCAATGCATTGTTGAAGGGTATCATTGAGAAAAGAGAGAAGGCAATGAAAGTTGGCGAAACTGCTAATCATGATTTATTAGGTCTACTAATGGAATCCAACTACAGAGATATGCAAGAAAATGATGAGAGGAAGAATGTTGGAATGAGCATCAAAGATGTCATTGAGGAGTGTAAGCTATTCTACCTTGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACGATGGTTCTATTAAGCAAGCATTCAAACTGGCAAACTCGCGCAAGGGAAGAGGTTTTACGGGTTTTTGGTAATAAAAAACCAGATGGTGATGGCTTAAATCACCTCAAAATTGTTACTATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTGTCCATGCTTCTTCGAACTGTTTTTGCCGACAGCCAAGTGGGAGGATTGTATTTACCAGATGGAGTGCAGATTGCTTTGCCAATCCTCCTACTTCACCACGATCATGAAATTTGGGGAGAGGATGCAAAGGAATTCAACCCGGGGAGATTTTCAGAAGGAGTTTCTAAGGCAGCAAAGACCCAAGTTTCATTTTTTCCATTTGGTTATGGTCCTCGGATATGCGTTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAACGTTTCTCATTTGAACTTTCCCCATCCTATGCTCATGCACCTATTAGTCTTATAACTATGCAACCCCAGTATGGTGCACACCTGATTTTACATGGACTTTAG 1371 41.94 MINEANSRPISFSDDIVQRVLPFHDHSIQKYGKNSFTWLGPKPVVNIMEPELIRDVFLKHNAFQKVPPHPLGKLLATGVVALEGEQWTKRRKIINPAFHLEKLKHMVSAFQLSCSDMVNKWEKKLSLDGSCELDVWPYLENLAGDVISRTAFGSSYEEGRRIFQLQREQAHLAIQVTRSIYVPGWRFFPTKTNRRMRQISNEVNALLKGIIEKREKAMKVGETANHDLLGLLMESNYRDMQENDERKNVGMSIKDVIEECKLFYLAGQETTSVLLLWTMVLLSKHSNWQTRAREEVLRVFGNKKPDGDGLNHLKIVTMIFHEVLRLYPPVSMLLRTVFADSQVGGLYLPDGVQIALPILLLHHDHEIWGEDAKEFNPGRFSEGVSKAAKTQVSFFPFGYGPRICVGQNFAMMEAKMALAMILQRFSFELSPSYAHAPISLITMQPQYGAHLILHGL* 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 12924113 12928461 + Vvi19g852 Vvi19g852 782351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g852 456 PANTHER CYTOCHROME P450 72A11-RELATED 2 447 - -
Vvi19g852 456 PRINTS E-class P450 group I signature 28 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS E-class P450 group I signature 317 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Vvi19g852 456 Gene3D Cytochrome P450 16 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 447 - -
Vvi19g852 456 SUPERFAMILY Cytochrome P450 19 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g852 456 Pfam Cytochrome P450 29 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g852 - - vvi:100260702 924.465