Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g856 ATGAACCCAGTTCATAAGAAAATCCCGGTTCTGATCCACAATGGAAAGCCCATTTGTGAGTCTCTGATAATAGTTCAGTATATTGATGAGGTTTGGAAGGATAAATCTCCATTGTTGCCTAGTGACCCATACCAGAGAGCTCAGGCCAGGTTCTGGGCGGACTACGTAGACAAGAAGCTCTATGAACTTGGAGGGAAGATATGGTCAACCAAAGGAGAAGAGCAGGAAACAGGCAAGAAGGAATTCATAGAGTGCCTCAAGCTTTTGGAAGGAGAGCTTGGAGAGAAGCCTTACTTCGGGGGTGAAAAAATTGGGTTTGTGGATGTGGCCCTGGTGACCTTCTCTTGCTGGTTTTATGCATACGAGACCTTTGGCAACTTCAGCATAGAGGCGGAGTGCCCCAAGTTGATCGCTTGGACCAAGAGGTGCATGGAAAAGGAGAGCGTGTCGTCTTCTCTGGAAGACCCACACAAGGTCCATGGCTTTATCATGGGGATGAGAAAGAGGTTTGGTATAGAAGTAAAAGGGAAACATCATGGGCTATTGAGTAGTGTTGTTTAG 561 46.52 MNPVHKKIPVLIHNGKPICESLIIVQYIDEVWKDKSPLLPSDPYQRAQARFWADYVDKKLYELGGKIWSTKGEEQETGKKEFIECLKLLEGELGEKPYFGGEKIGFVDVALVTFSCWFYAYETFGNFSIEAECPKLIAWTKRCMEKESVSSSLEDPHKVHGFIMGMRKRFGIEVKGKHHGLLSSVV* 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 13089547 13090890 - Vvi19g856 Vvi19g856 782355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g856 186 Gene3D Glutaredoxin 1 41 - -
Vvi19g856 186 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 168 IPR045073 -
Vvi19g856 186 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 42 170 IPR010987 -
Vvi19g856 186 Pfam Glutathione S-transferase, N-terminal domain 2 30 IPR004045 -
Vvi19g856 186 SFLD Main (cytGST) 1 173 - -
Vvi19g856 186 Gene3D - 42 173 - -
Vvi19g856 186 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 1 168 - -
Vvi19g856 186 CDD GST_C_Tau 43 166 IPR045074 GO:0004364|GO:0006749
Vvi19g856 186 SUPERFAMILY Thioredoxin-like 1 35 IPR036249 -
Vvi19g856 186 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 36 IPR004045 -
Vvi19g856 186 Pfam Glutathione S-transferase, C-terminal domain 70 146 IPR004046 -
Vvi19g856 186 SFLD Main.3: Omega- and Tau-like 1 173 IPR045073 -
Vvi19g856 186 SUPERFAMILY GST C-terminal domain-like 30 170 IPR036282 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g856 K00799 - vvi:100261799 348.206