Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g880 ATGGAAATGAAGCAGCTGAACTTAGTTGCCTTATCCTTTGCTTTCATCACTATCCTAATATATGCATGGAGGATACTGAATTGGATGTGGTTGAGGCCGAAAAGGCTAGAGAGGTGCCTTAAACAGCAAGGTCTGGCTGGAAATTCTTACAGGCTGTTGCATGGGGACTTCAAAGAAATGTTCATGATGATAAAGGAAGCATCTTCAAGACCCATCAGCATCTCTGATGATATTGTGCAGCGTATCACACCTTTTCATTACCATTCCATCAAGAAATATGGTAAAAGTTCTTTTATATGGATGGGCCCAAAACCAAGGGTCAACATTATGGAGCCTGAACTGATAAGGGATGTTTTGTCCATGCACACTGTCTTCCGAAAGTCAAGGGTTCATGCATTTGTGAAGCTGCTTGTTTCTGGACTACCTTTTTTGGATGGTGAGAAATGGGCAAAACATAGAAAGATCATAAACCCCGCATTCCGACTAGAAAAACTGAAGAACATGTTACCCGCATTTCATTTGAGCTGTAGCGACATGATAAGCAAATGGGAGGGGAAGCTCTCAACAGAGGGGTCATGTGAGTTGGATGTTTGGCCCTATCTTCAAAATTTGACAAGTGATGCGATTTCGCGGACAGCATTTGGTAGTAACTACGAAGAAGGAAGAATGATATTCGAACTGCAGAGAGAGCAAGCGCAACTTTTGGTCCAGTTCTCAGACTCAGCTTACATTCCAGGATGGTGGTTTTTGCCTACAAAGTCCAATAAGAGGATGAAGCAAATTAGAAAAGAAGTAAATGCATTGTTGTGGGGTATTATCGACAAAAGAGGGAAGGCAATGAAGGCAGGCGAAACTCTTAATGATGACTTATTAGGTATACTACTGGAATCCAATTTTAAAGAAATTCAAGAACATGAAAATGACAAGAACGTTGGAATGTGTATCAAAGATGTCATTGAGGAGTGTAAGATATTTTACTTTGCCGGTCAAGAGACTACCTCAGCTCTGCTTCTATGGACAATGGTTCTATTAAGCAAACATCCAAACTTGCAAGCTCGTGCAAGAGAAGAGGTTTTACATGTTTTTGGCAACAACAAACCCGAAGGAGATGGACTAAATCACCTTAAAATTGTTATGATGATTCTTCATGAGGTTCTTAGGCTATATCCACCGGTCCCCTTGCTTGCTCGAACTGTTTATGAGGACATCCAAGTAGGAGACATGTATTTACCTGCTGGAGTGGATGTCTCCTTACCAACAATCCTGGTACATCATGATCATGAAATTTGGGGAGAAGATGCAAGGGAGTTCAATCCAGAGAGGTTCTCCTAA 1332 41.37 MEMKQLNLVALSFAFITILIYAWRILNWMWLRPKRLERCLKQQGLAGNSYRLLHGDFKEMFMMIKEASSRPISISDDIVQRITPFHYHSIKKYGKSSFIWMGPKPRVNIMEPELIRDVLSMHTVFRKSRVHAFVKLLVSGLPFLDGEKWAKHRKIINPAFRLEKLKNMLPAFHLSCSDMISKWEGKLSTEGSCELDVWPYLQNLTSDAISRTAFGSNYEEGRMIFELQREQAQLLVQFSDSAYIPGWWFLPTKSNKRMKQIRKEVNALLWGIIDKRGKAMKAGETLNDDLLGILLESNFKEIQEHENDKNVGMCIKDVIEECKIFYFAGQETTSALLLWTMVLLSKHPNLQARAREEVLHVFGNNKPEGDGLNHLKIVMMILHEVLRLYPPVPLLARTVYEDIQVGDMYLPAGVDVSLPTILVHHDHEIWGEDAREFNPERFS* 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 14894754 14897484 + Vvi19g880 Vvi19g880 782379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g880 443 SUPERFAMILY Cytochrome P450 81 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 443 - -
Vvi19g880 443 Gene3D Cytochrome P450 77 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PANTHER CYTOCHROME 8 443 - -
Vvi19g880 443 Pfam Cytochrome P450 91 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g880 443 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g880 - - vvi:100250517 869.381