Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g882 ATGGAAATGAAGCAGCTGAACTTAGTTGCCTTATCCTTTGCTTTCATCACTATCCTAATATATGCATGGAGGATACTGAATTGGATGTGGTTGAGGCCGAAAAGGCTAGAGAGGTGCCTTAAACAGCAAGGTCTGGCTGGAAATTCTTACAGGCTGTTGCATGGGGACCTCAAAGAAATGTTCATGATGATAAAGGAAGCATCTTCAAGACCCATCAGCATCTCTGATGATATTGTGCAGCGTATCGCACCTTTTCAGTACCATTCCATCAAGAAATATGGTAAAAGTTCTTTTATATGGATGGGCCCAAAACCAAGGGTCAACATTATGGAGCCTGAACTGATAAGGGATGTTTTGTCCATGCACACTGTCTTCCGAAAGCCAAGGGTTCATGCACTTGTGAAGCTGCTTGTTTCTGGACTACTTTTTTTGGATGGTGAGAAATGGGCTAAACATAGAAAGATCATAAACCCCGCATTCCGACTAGAAAAACTGAAGAACATGTTACCCGCATTTCATTTGAGCTGTAGCGACATGATAAGCAAATGGGAGGGGAAGCTCTCAACAGAGGGGTCATGTGAGTTGGATGTTTGGCCCTATCTTCAAAATTTGACAGGCGATGCGATTTCGCGGACAGCATTTGGTAGTAACTATGAAGAAGGAAGAATGATATTCGAACTGCAGAGAGAGCAAGCGCAACTTTTGGTCCAGTTCTCAGAGTCAGCTTTCATTCCAGGATGGCGGTTTTTGCCTACAAAATCCAATAAGAGGATGAAGCAAATTAGAAAAGAAGTAAATGCATTGTTGTGGGGTATTATCGACAAAAGAGGGAAGGCAATGAAGGCTGGCGAAACTCTTAATGATGACTTATTAGTTCTGCTTCTATGGACAATGGTTCTATTAAGCAAACATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACATGTTTTTGGCAACAACAAACCCGAAGGAGATGGACTAAATCACCTTAAAATTGTTATGATGATTCTTCATGAGGTTCTTAGGCTATATCCACCGGTCCCCTTGCTTGCTCGAACTGTTTATGAGGACATCCAAGTAGGAGACATGTATTTACCTGCTGGAGTGGATGTCTCCTTACCAACAATCCTGGTACATCATGATCATGAAATTTGGGGAGAAGATGCAAGGGAGTTCAATCCAGAGAGGTTCTCCCAAGGAGTTTTGAAGGCAACGAAAAGTCCAGTTTCATTCTTCCCCTTTGGTTGGGGTTCTCGATTATGCATTGGACAAAACTTTGCAATATTGGAAGCTAAAATGGTGCTTGCAATGATCCTACAGCGCTTCTCATTCAGCCTTTCACCATCCTATTCTCATGCTCCTTGTAGTCTTGTTACTTTGAAACCACAATATGGGGCACACTTGATTTTACATGGGATCTAG 1428 42.44 MEMKQLNLVALSFAFITILIYAWRILNWMWLRPKRLERCLKQQGLAGNSYRLLHGDLKEMFMMIKEASSRPISISDDIVQRIAPFQYHSIKKYGKSSFIWMGPKPRVNIMEPELIRDVLSMHTVFRKPRVHALVKLLVSGLLFLDGEKWAKHRKIINPAFRLEKLKNMLPAFHLSCSDMISKWEGKLSTEGSCELDVWPYLQNLTGDAISRTAFGSNYEEGRMIFELQREQAQLLVQFSESAFIPGWRFLPTKSNKRMKQIRKEVNALLWGIIDKRGKAMKAGETLNDDLLVLLLWTMVLLSKHPNWQARAREEVLHVFGNNKPEGDGLNHLKIVMMILHEVLRLYPPVPLLARTVYEDIQVGDMYLPAGVDVSLPTILVHHDHEIWGEDAREFNPERFSQGVLKATKSPVSFFPFGWGSRLCIGQNFAILEAKMVLAMILQRFSFSLSPSYSHAPCSLVTLKPQYGAHLILHGI* 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 14920740 14923863 + Vvi19g882 Vvi19g882 782381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g882 475 PRINTS P450 superfamily signature 303 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 Pfam Cytochrome P450 91 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 Pfam Cytochrome P450 294 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PANTHER CYTOCHROME 14 294 - -
Vvi19g882 475 Gene3D Cytochrome P450 294 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Vvi19g882 475 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 294 - -
Vvi19g882 475 PANTHER CYTOCHROME P450 FAMILY MEMBER 292 471 - -
Vvi19g882 475 Gene3D Cytochrome P450 70 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 SUPERFAMILY Cytochrome P450 81 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g882 475 PANTHER CYTOCHROME 292 471 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g882 - - vvi:100250517 913.294