Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g883 | ATGGAAATGAAGCAGCTGAACTTAGTTGCCTTATCCTTTACTTTCATCACTATCCTAATATATGCATGGAGGATACTGAATTGGATGTGGTTGAGGCCGAAAAGGCTAGAGAGGTGCCTTAAACAGCAAGGTCTGGCGGGAAATTCTTACAGGCTGTTGCATGGGGACTTCAAAGAAATGTTCATGATGATAAAGGAAGCAACTTCAAGACCCATCAGCATCTCTGATGATATTGTGCAGCGTATCGCACCTTTTCATTACCATTCCATCAAGAAATATGGTAAAAGTTCTTTTATATGGATGGGCCCAAAACCAAGGGTCAACATTATGGAGCCTGAACTGATAAGGGATGTTTTGTCCATGCACACTGTCTTCCGAAAGCCAAGGGTTCATGCACTTGTGAAGCTGCTTGTTTCTGGACTACTTTTTTTGGATGGTGAGAAATGGGCTAAACATAGAAAGATCATAAACCCCGCATTCCGACTAGAAAAAGTGAAGAACATGTTACCCGCATTTCATTTGAGCTGTAGCGACATGATAAGCAAATGGGAGGGGAAGCTCTCAACAGAGGGGTCATGTGAGTTGGATGTTTGGCCCTATCTTCAAAATTTGACAGGTGATGCGATTTCGCGGACAGCATTTGGTAGTAACTATGAAGAAGGAAGAATGATATTCGAACTGCAGAGAGAGCAAGCGCAACTTTTGGTCCAGTTCTCAGAGTCAGCTTTCATTCCAGGATGGCGGTTTTTGCCTACAAAGTCCAATAAGAGGATGAAGCAAAATAGAAAAGAAGTAAATGAGTTGTTGTGGGGTATTATTGACAAAAGAGAGAAGGCAATGAAGGCTGGCGAAACTCTTAATGATGACTTATTAGGTATACTACTGGAATCCAATTTTAAAGAAATTCAAGAACATGGCAATGACAAGAACGTTGGAATGAGTATCAAAGATGTCATTGACGAGTGTAAGATATTTTACTTTGCCGGTCAAGAGACTACCTCAGTTCTGCTTCTATGGACAATGATTCTATTAAGCAAACATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACATGTTTTTGGCAACAACAAACCCGAAGGAGATGGACTAAATCACCTTAAAATTGTTATGATGATTCTTCATGAGGTTCTTAGGCTATATCCACCGGTCCCCTTGCTTGCTCGAACTGTTTATGAGGACATCCAAGTAGGAGACATGTATTTACCTGCTGGAGTGGATGTCTCCTTACCAACAATCCTGGTACATCATGATCATGAAATTTGGGGAGAAGATGCAAGGGAGTTCAATCCAGAGAGGTTCTCCCAAGGAGCTTTGAAGGCAACGAAAAGTCTAGTTTCATTCTTCCCCTTTGGTTGGGGTTCTCGATTATGCATTGGACAAAACTTTGCAATATTGGAAGCTAAAATGGTGCTTGCAATGATCCTACAGCGCTTCTCATTCAGCCTTTCACCATCCTATTCTCATGCTCCTTGTAGTCTTGTTACTTTGAAACCCCAATATGGGGCACACTTGATTTTACATGGGATCTAG | 1557 | 41.68 | MEMKQLNLVALSFTFITILIYAWRILNWMWLRPKRLERCLKQQGLAGNSYRLLHGDFKEMFMMIKEATSRPISISDDIVQRIAPFHYHSIKKYGKSSFIWMGPKPRVNIMEPELIRDVLSMHTVFRKPRVHALVKLLVSGLLFLDGEKWAKHRKIINPAFRLEKVKNMLPAFHLSCSDMISKWEGKLSTEGSCELDVWPYLQNLTGDAISRTAFGSNYEEGRMIFELQREQAQLLVQFSESAFIPGWRFLPTKSNKRMKQNRKEVNELLWGIIDKREKAMKAGETLNDDLLGILLESNFKEIQEHGNDKNVGMSIKDVIDECKIFYFAGQETTSVLLLWTMILLSKHPNWQARAREEVLHVFGNNKPEGDGLNHLKIVMMILHEVLRLYPPVPLLARTVYEDIQVGDMYLPAGVDVSLPTILVHHDHEIWGEDAREFNPERFSQGALKATKSLVSFFPFGWGSRLCIGQNFAILEAKMVLAMILQRFSFSLSPSYSHAPCSLVTLKPQYGAHLILHGI* | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 14954548 | 14957701 | + | Vvi19g883 | Vvi19g883 | 782382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g883 | 518 | Gene3D | Cytochrome P450 | 78 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | Pfam | Cytochrome P450 | 91 | 494 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi19g883 | 518 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 14 | 514 | - | - | |
Vvi19g883 | 518 | SUPERFAMILY | Cytochrome P450 | 81 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PANTHER | CYTOCHROME | 14 | 514 | - | - | |
Vvi19g883 | 518 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g883 | 518 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g883 | - | - | vvi:100248909 | 1046.19 |