Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g884 ATGTATCTCATAGAGAAACAAGAGAGAGAGTTGCAAGAAGCATGGGAAGGCTTGAGCTTAGGGAATTCCATACAACCACATCTCTTAAAACTTGAAATCATATTGAAATTAATTAGTTGTAAGATGCATTTCTTCAAACAAAAGGAGCCCAATAATTGGACGAGTAGAGCAATTCACAGAGCACTCCTGGAAGTCTCTTCCAAACTGGAAATGAAGCTTAGCTCAGTTGCAATTTCCTTTGCTTTTATTACTCTCCTAATATATGCATGGAGATTATTGAATTGGGTGTGGTTGAGACCAAAGAAGCTAGAAAGGTGTCTTAGGCAGCAAGGTCTGACGGGAAATTCCTACAGATTGTTACATGGGGATTTTAGAGAGATGTTAAGGATGATCAGCGAAGCAAATTCAAGATCCATCAGCTTATCCGATGATATTGTGCAGCGAGTTCTCCCCTTCCATTGTCATTCCATCAAGAAATATGGTAAAAATTATTTTATATGGATGGGCCCAAAACCAGTGGTAAACATTATGGACCCTGAGCTGATAAGGGATGTTTTCTTGAAGTACAATGCCTTTCGCAAACCACCTCCGCACCCGCTTGGCAAGCTGCTGGCTACTGGTCTTGTTACATTGGAAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGTTGAAGCACATGGTACCCGCATTCCAATTGAGTTGTAGTGACATGGTAAATAAATGGGAGAAGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAAAATTTGGCAGGAGATGCGATTTCTAGAACAGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCAAGGTTTTCCGGTCAGTTTATATTCCTGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATGAGGCAAATTAGCAATGAAGTCCATGCATTGTTAAAAGGTATCATCGAGAGAAGAGAGAAGGCAATGAAGGTTGGTGAAACTGCTAATGATGATTTATTAAGTCTACTAATGGAATCCAACTTCAGAGAAATGCAAGAACATGATGAGAGGAAGAATGTTGGAATGAGCATCAAAGATGTCATCGAGGAGTGTAAGCTATTCTACTTTGCTGGCCAAGAGACTACCTCGGATTTACTTCTGTGGACTATGGTTCTATTAAGCAAGCATTCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAAGTTTTTGGCAATAAAAAACCAGATGGCGATGGCTTAAATCACCTCAAAATTGTTACAATTATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTATCTATGCTCATTCGAACTGTTGTTGCGGATAGTCAAGTGGGAGGATGGTATTTTCCAGATGGGGCGCTTATCACTTTGCCAATCCTCCTAATTCACCACGATCATGAAATTTGGGGAGAAGATGCAAAGGAATTCAACCCAGAGAGATTTTCTGAAGGAGTTTCTAAGGCAACAAAGGGCCAATTTGCCTTCTATCCATTTGGTTATGGTCCTCGGCTAGTGTCGAATGTAAATTGTCCACGCTCCCTTTTCCTTAAAATGTATTGTATCAAGAATTTTGATTGTGTTAAGAATTTGATTGTATCAAAATTAGTGACTGTATTAGCTTGTAATTGGCAACATAGAAATCTTACTTACAACAAGTGTATTTGGTTGGAAAAGGGACACGTGGAGGGGAGTCCCCTACAATGCCCCCTTAACCCGTCTACCTATGTTCGGGTAGAGGTAGAATGGGTTGCGTGTCTCTTCAAGTCATCCAGTTGCTTTTGGGACATGTGTCACTTAGGGAATTAA 1890 40.69 MYLIEKQERELQEAWEGLSLGNSIQPHLLKLEIILKLISCKMHFFKQKEPNNWTSRAIHRALLEVSSKLEMKLSSVAISFAFITLLIYAWRLLNWVWLRPKKLERCLRQQGLTGNSYRLLHGDFREMLRMISEANSRSISLSDDIVQRVLPFHCHSIKKYGKNYFIWMGPKPVVNIMDPELIRDVFLKYNAFRKPPPHPLGKLLATGLVTLEGEQWTKRRKIINPAFHLEKLKHMVPAFQLSCSDMVNKWEKKLSKDGSCELDIWPDLENLAGDAISRTAFGSSYEEGRRIFQLQKEQAHLAVKVFRSVYIPGWRFVPTKTNKRMRQISNEVHALLKGIIERREKAMKVGETANDDLLSLLMESNFREMQEHDERKNVGMSIKDVIEECKLFYFAGQETTSDLLLWTMVLLSKHSNWQARAREEVLQVFGNKKPDGDGLNHLKIVTIIFHEVLRLYPPVSMLIRTVVADSQVGGWYFPDGALITLPILLIHHDHEIWGEDAKEFNPERFSEGVSKATKGQFAFYPFGYGPRLVSNVNCPRSLFLKMYCIKNFDCVKNLIVSKLVTVLACNWQHRNLTYNKCIWLEKGHVEGSPLQCPLNPSTYVRVEVEWVACLFKSSSCFWDMCHLGN* 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 15020745 15036441 - Vvi19g884 Vvi19g884 782383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g884 629 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS E-class P450 group I signature 271 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS E-class P450 group I signature 384 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS E-class P450 group I signature 404 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS E-class P450 group I signature 446 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS E-class P450 group I signature 487 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS E-class P450 group I signature 523 533 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 74 534 - -
Vvi19g884 629 SUPERFAMILY Cytochrome P450 148 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS P450 superfamily signature 395 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PRINTS P450 superfamily signature 524 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 Pfam Cytochrome P450 158 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 Gene3D Cytochrome P450 135 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g884 629 PANTHER CYTOCHROME P450 FAMILY MEMBER 74 534 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g884 - - vvi:100262651 944.88