Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g885 ATGACATGTGTCCTTATCTCGAGGAAATTAAAGACTTATAGATTACTTATCTCAGTTGCAATTTCCTTTGCTTTTATTACTCTCCTAATATATGCATGGAGACTATTGAATTGGGTGTGGTTGAGACCAAAGAAGCTAGAAAGGTGTCTTCGGCAGCAAGGTATAACGGGAAATTCCTACAGATTGTTACATGGGGATGTTAGAGAGATGTTAAGGATGATTAGCGAAGCAAATTCAAGACCCATCAGCTTATCCGATGAGATCGTACAGCGAGTTCTCCCCTTCCATTATCATTCCCTCAAGAAATATGGTAAAAATTATTTTATATGGATGGGCCCAAAACCAGTGGTAAACATTATGGACCCTGAGTTGATAAGGGATGTTTTCTTGAGGTACAATGCCTTTCACAAACCAGCTCCGCACCCGCTTGGCAAGCTGCTGGCTACTGGTCTTGTTACATTGGAAGGTGAACAATGGACTAAACATAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGTTGAAGCACATGGTACCCGCATTCCAATTGAGTTGTGGTGACATGGTAAATAAATGGGAGAAGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAAAATTTGACAGGAGATGCGATTTCTAGAACAGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCAAGGTTTTCCGGTCAGTTTATATTCCTGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATAAGGCAAATTAGGAATGAACTCCATGCATTGTTAAAAGGCATCATCGAGAAAAGAGAGAAGGCAATGTTGGTTGGTGAAACTGCTAATGATGATTTATTAAGTCTACTAATGGAATCCAACTTCAGAGAAATGCAAGAACATGATGAGAGGAAAAATGTTGGAATGAGCATCGATGATGTCATTGAGGAGTGTAAGCTATTCTACTTTGCTGGCCAAGAGACTACCTCGGATTTACTTCTGTGGACAATGATTCTATTAAGCAAGCATTCAAATTGGCAAGCTCGTGCAAGAGAAGAGATTTTACAAGTTTTTGGCAATAAAAAACCAGATGGCAATGGCTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTATCTATGCTCATTCGAACTGTTTTTGTGGACAGCCAAGTGGGGCGATGGTATTTTCCAGTTGGATCGCATGTCGCTTTGCCAATCCTCCTAATTCACCATGATCATGAAATTTGGGGAGAGGATGCAAAAGAATTCAACCCCGAGAGATTTTCTGAAGGAGTTTCTAAGGCAACAAAGGGCGGCCAATTTGCCTTTTTTCCATTTGGTTATGGTCCTCGGGCGTGCATTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAGCGTTTCTCATTTGAACTTTCCCCATCTTATGCTCATGCACCTTTTAATGTTATAACTGTACAACCCCAATATGGTGCACACCTGATTTTACATGGACTTTAG 1590 40.5 MTCVLISRKLKTYRLLISVAISFAFITLLIYAWRLLNWVWLRPKKLERCLRQQGITGNSYRLLHGDVREMLRMISEANSRPISLSDEIVQRVLPFHYHSLKKYGKNYFIWMGPKPVVNIMDPELIRDVFLRYNAFHKPAPHPLGKLLATGLVTLEGEQWTKHRKIINPAFHLEKLKHMVPAFQLSCGDMVNKWEKKLSKDGSCELDIWPDLENLTGDAISRTAFGSSYEEGRRIFQLQKEQAHLAVKVFRSVYIPGWRFVPTKTNKRIRQIRNELHALLKGIIEKREKAMLVGETANDDLLSLLMESNFREMQEHDERKNVGMSIDDVIEECKLFYFAGQETTSDLLLWTMILLSKHSNWQARAREEILQVFGNKKPDGNGLNHLKIVTMIFHEVLRLYPPVSMLIRTVFVDSQVGRWYFPVGSHVALPILLIHHDHEIWGEDAKEFNPERFSEGVSKATKGGQFAFFPFGYGPRACIGQNFAMMEAKMALAMILQRFSFELSPSYAHAPFNVITVQPQYGAHLILHGL* 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 15084232 15089024 - Vvi19g885 Vvi19g885 782384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g885 529 Pfam Cytochrome P450 101 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 Gene3D Cytochrome P450 86 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Vvi19g885 529 SUPERFAMILY Cytochrome P450 91 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PANTHER CYTOCHROME 24 525 - -
Vvi19g885 529 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g885 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 525 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g885 - - vvi:100245388 1052.35