Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g885 | ATGACATGTGTCCTTATCTCGAGGAAATTAAAGACTTATAGATTACTTATCTCAGTTGCAATTTCCTTTGCTTTTATTACTCTCCTAATATATGCATGGAGACTATTGAATTGGGTGTGGTTGAGACCAAAGAAGCTAGAAAGGTGTCTTCGGCAGCAAGGTATAACGGGAAATTCCTACAGATTGTTACATGGGGATGTTAGAGAGATGTTAAGGATGATTAGCGAAGCAAATTCAAGACCCATCAGCTTATCCGATGAGATCGTACAGCGAGTTCTCCCCTTCCATTATCATTCCCTCAAGAAATATGGTAAAAATTATTTTATATGGATGGGCCCAAAACCAGTGGTAAACATTATGGACCCTGAGTTGATAAGGGATGTTTTCTTGAGGTACAATGCCTTTCACAAACCAGCTCCGCACCCGCTTGGCAAGCTGCTGGCTACTGGTCTTGTTACATTGGAAGGTGAACAATGGACTAAACATAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGTTGAAGCACATGGTACCCGCATTCCAATTGAGTTGTGGTGACATGGTAAATAAATGGGAGAAGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAAAATTTGACAGGAGATGCGATTTCTAGAACAGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCAAGGTTTTCCGGTCAGTTTATATTCCTGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATAAGGCAAATTAGGAATGAACTCCATGCATTGTTAAAAGGCATCATCGAGAAAAGAGAGAAGGCAATGTTGGTTGGTGAAACTGCTAATGATGATTTATTAAGTCTACTAATGGAATCCAACTTCAGAGAAATGCAAGAACATGATGAGAGGAAAAATGTTGGAATGAGCATCGATGATGTCATTGAGGAGTGTAAGCTATTCTACTTTGCTGGCCAAGAGACTACCTCGGATTTACTTCTGTGGACAATGATTCTATTAAGCAAGCATTCAAATTGGCAAGCTCGTGCAAGAGAAGAGATTTTACAAGTTTTTGGCAATAAAAAACCAGATGGCAATGGCTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTATCTATGCTCATTCGAACTGTTTTTGTGGACAGCCAAGTGGGGCGATGGTATTTTCCAGTTGGATCGCATGTCGCTTTGCCAATCCTCCTAATTCACCATGATCATGAAATTTGGGGAGAGGATGCAAAAGAATTCAACCCCGAGAGATTTTCTGAAGGAGTTTCTAAGGCAACAAAGGGCGGCCAATTTGCCTTTTTTCCATTTGGTTATGGTCCTCGGGCGTGCATTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAGCGTTTCTCATTTGAACTTTCCCCATCTTATGCTCATGCACCTTTTAATGTTATAACTGTACAACCCCAATATGGTGCACACCTGATTTTACATGGACTTTAG | 1590 | 40.5 | MTCVLISRKLKTYRLLISVAISFAFITLLIYAWRLLNWVWLRPKKLERCLRQQGITGNSYRLLHGDVREMLRMISEANSRPISLSDEIVQRVLPFHYHSLKKYGKNYFIWMGPKPVVNIMDPELIRDVFLRYNAFHKPAPHPLGKLLATGLVTLEGEQWTKHRKIINPAFHLEKLKHMVPAFQLSCGDMVNKWEKKLSKDGSCELDIWPDLENLTGDAISRTAFGSSYEEGRRIFQLQKEQAHLAVKVFRSVYIPGWRFVPTKTNKRIRQIRNELHALLKGIIEKREKAMLVGETANDDLLSLLMESNFREMQEHDERKNVGMSIDDVIEECKLFYFAGQETTSDLLLWTMILLSKHSNWQARAREEILQVFGNKKPDGNGLNHLKIVTMIFHEVLRLYPPVSMLIRTVFVDSQVGRWYFPVGSHVALPILLIHHDHEIWGEDAKEFNPERFSEGVSKATKGGQFAFFPFGYGPRACIGQNFAMMEAKMALAMILQRFSFELSPSYAHAPFNVITVQPQYGAHLILHGL* | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 15084232 | 15089024 | - | Vvi19g885 | Vvi19g885 | 782384 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g885 | 529 | Pfam | Cytochrome P450 | 101 | 505 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | Gene3D | Cytochrome P450 | 86 | 526 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi19g885 | 529 | SUPERFAMILY | Cytochrome P450 | 91 | 526 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PANTHER | CYTOCHROME | 24 | 525 | - | - | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 327 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 100 | 119 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 347 | 373 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 430 | 454 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 389 | 407 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | E-class P450 group I signature | 214 | 232 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | P450 superfamily signature | 390 | 401 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | P450 superfamily signature | 477 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | P450 superfamily signature | 338 | 355 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi19g885 | 529 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 24 | 525 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g885 | - | - | vvi:100245388 | 1052.35 |