Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g890 ATGAAGCATAGCTCAGTTGCAATTTCTTTTGGGTTCCTTACTGTGCTCATAAGCTGTTTATGGAGGCTACTGAATTGGGTGTGGTTGAGGCCAAAGAGGTTAGAAAGATGCCTTAGAGAGCAAGGCCTGGCTGGGAATTCTTATAGGCTTTTACATGGGGACTTTAAAGAGATGTCCATGATGTTAAAAGAAGCATATTCAAGACCAATCAGCCTCTCCGATGATATTGCTCCGCGTGTCCTGCCCTTCCATTGTCATTTCATTAAGAAATACGGTAAAAATTTCTTTGCATGGTTCGGTCCAAATCCAATGGTAAACATTATGGAGCCTGAGCTAATAAGGGATATTTTGTTAAAGTCCAATGTCTTTCAAAAGCCACCCCCACACCCACTTGGCAAGTTGCTGGTTTCTGGTCTGGTGACCTTGGAAGGCGAACGATGGGCTAAACGTAGAAAGAACATCAACCCAGCTTTCCATCTAGAAAAGTTGAAGAATATGTTGCCGGCATTTCATTTGAGTTGTAGCGACATGGTGACCAAATGGAAAATGCTTTCGGTGGGGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGTAGTAGTTATGAAGAAGGAAGAAGGATATTCCAGCTCCAGAAAGAACAAACACATCTTGCAATCCAGGTTACAATGTCAGTTTATATCCCGGGATGGAGGTTTTTACCCACAAAGACGAACAGGAGGATGAAGCAAATAAGCAAAGAAGTATATGCATTGTTGAGGGGTATCGTTAACAAAAGGGAGAAGGCAATGAAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATACTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACAAGAAGATTGGAATGAGTGTCAGAGATGTCATTGAAGAGTGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTGTATGGACAATGGTCCTGCTAAGCGAGCATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAACCGGAAGCTGATGGATTAAATCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAATAGCAATGCTTGCTAGAGCTGTTTATAAGGACACTCAAGTGGGAGACATGTGTTTTCCAGCTGGAGTGCAAGTCCGCCCACCATCCTAG 1254 42.03 MKHSSVAISFGFLTVLISCLWRLLNWVWLRPKRLERCLREQGLAGNSYRLLHGDFKEMSMMLKEAYSRPISLSDDIAPRVLPFHCHFIKKYGKNFFAWFGPNPMVNIMEPELIRDILLKSNVFQKPPPHPLGKLLVSGLVTLEGERWAKRRKNINPAFHLEKLKNMLPAFHLSCSDMVTKWKMLSVGGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIFQLQKEQTHLAIQVTMSVYIPGWRFLPTKTNRRMKQISKEVYALLRGIVNKREKAMKAGETANSDLLGILMESNFREIQEHQNNKKIGMSVRDVIEECKLFYLAGQETTSVLLVWTMVLLSEHPNWQARAREEVLQVFGNKKPEADGLNHLKIVTMIFHEVLRLYPPIAMLARAVYKDTQVGDMCFPAGVQVRPPS* 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 15177025 15182340 - Vvi19g890 Vvi19g890 782389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g890 417 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi19g890 417 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 413 - -
Vvi19g890 417 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 PANTHER CYTOCHROME 13 413 - -
Vvi19g890 417 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 Gene3D Cytochrome P450 36 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 Pfam Cytochrome P450 86 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g890 417 SUPERFAMILY Cytochrome P450 79 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g890 - - vvi:100255558 738.028