Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g921 | ATGAATCCAGTTCATAAGAAAATCCCGGTTCTGATCCACAATGGAAAGCCCATTTGTGAGTCTCTGTTAATAGTTCAGTATATTGATGAGGTTTGGCACGATAAATCTCCGCTTTTGCCTAGTGACCCATACCAGAGAGCCCAGGCCAGGTTCTGGGCGGACTACGTAGACAAGAAGCTCTATGAACTTGGAAGGAAGATATGGTCAACCAAAGGAGAAGAGCAGGAAACAGCCAAGAAGGAATTCATAGAGTGCCTCAAGCTTCTGGAAGGAGAGCTTGGAGAGAAGCCTTACTTCGGCGGTGAAAAAATTGGGTTTGTGGATGTGGCTCTGGTGACCTTCTCTTGCTGGTTTCATGCATATGAGAGCTTTGGAAACTTCAGCATAGAGGCGGAGTGTCCCAAGTTGATAGCTTGGACCAAGAGGTGCATGGAAAAGGAGAGCGTGTCGTCTTCTCTGGAAGACCCACACAAGGTCCATGGCTTTGTTATGGGGATGAGAAAGAAGCTTGGCATAGAATAA | 522 | 46.74 | MNPVHKKIPVLIHNGKPICESLLIVQYIDEVWHDKSPLLPSDPYQRAQARFWADYVDKKLYELGRKIWSTKGEEQETAKKEFIECLKLLEGELGEKPYFGGEKIGFVDVALVTFSCWFHAYESFGNFSIEAECPKLIAWTKRCMEKESVSSSLEDPHKVHGFVMGMRKKLGIE* | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 16570450 | 16572001 | + | Vvi19g921 | Vvi19g921 | 782420 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g921 | 173 | Gene3D | Glutaredoxin | 1 | 41 | - | - | |
Vvi19g921 | 173 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 36 | IPR004045 | - | |
Vvi19g921 | 173 | CDD | GST_C_Tau | 43 | 166 | IPR045074 | GO:0004364|GO:0006749 | |
Vvi19g921 | 173 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 42 | 172 | IPR010987 | - | |
Vvi19g921 | 173 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 168 | IPR045073 | - | |
Vvi19g921 | 173 | SUPERFAMILY | GST C-terminal domain-like | 30 | 170 | IPR036282 | - | |
Vvi19g921 | 173 | Pfam | Glutathione S-transferase, C-terminal domain | 69 | 146 | IPR004046 | - | |
Vvi19g921 | 173 | SUPERFAMILY | Thioredoxin-like | 1 | 35 | IPR036249 | - | |
Vvi19g921 | 173 | SFLD | Glutathione Transferase (cytosolic) | 1 | 171 | IPR040079 | - | |
Vvi19g921 | 173 | SFLD | Main.3: Omega- and Tau-like | 1 | 171 | IPR045073 | - | |
Vvi19g921 | 173 | PANTHER | S-TRANSFERASE TAU 22, PUTATIVE-RELATED | 1 | 168 | - | - | |
Vvi19g921 | 173 | Gene3D | - | 42 | 173 | - | - | |
Vvi19g921 | 173 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 30 | IPR004045 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g921 | K00799 | - | vvi:100245600 | 353.214 |