Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g922 ATGGCGATTGACTCAGATTTTGATTATGGTGAGGGATTTGTCCAAAATGCTGGGTTTCTTCACACAGTCCTTAATAAACTTCTCTATGAACTTGGAAGGAAGATATGGTCAACCAAAGGAGAAGAGCAGGAAACAGCCAAGAAGGAATTCATAGAGTGCCTTAAGCTTTTGGAAGGAGAGCTTGGAGAGAAGCCTTACTTCGGTGGTGAAAAAATTGGGTTTGTAGATGTGGCTCTGGTGACCTTCTCTTGCTGGTTTTATGCATACGAGACCTTTGGCAACTTCAGCATAGAGGCGGAGTGCCCCAAGTTGATCGCTTGGACCAAGAGGTGCATGGAAAGGGAGAGCGTGTCGTCTTCTCTTGCAGACCCCCACAAGGTCCATGACTTTGTCACGTGGATGAGAAAGAAGTTTGGTATTGAATAA 426 45.31 MAIDSDFDYGEGFVQNAGFLHTVLNKLLYELGRKIWSTKGEEQETAKKEFIECLKLLEGELGEKPYFGGEKIGFVDVALVTFSCWFYAYETFGNFSIEAECPKLIAWTKRCMERESVSSSLADPHKVHDFVTWMRKKFGIE* 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 16593567 16595273 + Vvi19g922 Vvi19g922 782421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g922 141 CDD GST_C_Tau 28 134 IPR045074 GO:0004364|GO:0006749
Vvi19g922 141 SUPERFAMILY GST C-terminal domain-like 20 138 IPR036282 -
Vvi19g922 141 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 138 IPR010987 -
Vvi19g922 141 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 17 133 - -
Vvi19g922 141 Pfam Glutathione S-transferase, C-terminal domain 38 115 IPR004046 -
Vvi19g922 141 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 17 133 IPR045073 -
Vvi19g922 141 Gene3D - 16 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g922 K00799 - vvi:100232878 218.394