Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g924 ATGATAATAGTTCAGTATATTGATGAGGTTTGGAACAAAAAATCTCCGTTGTTGCCTAGTGACCCATACCAGAGAGCTCAGGCCAGGTTCTGGGCGGACTACATAGACAAGAAGCTCTATGAACTTGGAAGGAGGATATGGTCAACCAAAGGAGAAGAGCAGGAAACAGCCAAGAATGAATTCATAGAGTACCTTAAGATTTTGGAAGGAGAGCTTGGAGAGAAGCCTTACTTCGGTGGTGAGAAATTTGGGTTTGTGGATGTGGCTCTGGTGACTTTCTCAACCTTGTTTTATGCGTATGAGAGCTTTGGTAACTTCAGCATAGAGGTGGAGTGCCCCAAGTTGATCGCTTGGACCAAGAGGTGCATGGAAAAGGAGAACCCACACAAGGTCCATGACTTTGTCTTGTGGATGAGAAAGAAGTTCCGTGTAGAATAA 438 44.52 MIIVQYIDEVWNKKSPLLPSDPYQRAQARFWADYIDKKLYELGRRIWSTKGEEQETAKNEFIEYLKILEGELGEKPYFGGEKFGFVDVALVTFSTLFYAYESFGNFSIEVECPKLIAWTKRCMEKENPHKVHDFVLWMRKKFRVE* 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 16626399 16627945 + Vvi19g924 Vvi19g924 782423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g924 145 CDD GST_C_Tau 22 138 IPR045074 GO:0004364|GO:0006749
Vvi19g924 145 Gene3D - 21 145 - -
Vvi19g924 145 SFLD Glutathione Transferase (cytosolic) 1 125 IPR040079 -
Vvi19g924 145 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 138 IPR045073 -
Vvi19g924 145 Pfam Glutathione S-transferase, C-terminal domain 48 125 IPR004046 -
Vvi19g924 145 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 1 138 - -
Vvi19g924 145 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 21 142 IPR010987 -
Vvi19g924 145 SUPERFAMILY GST C-terminal domain-like 9 141 IPR036282 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g924 K00799 - vvi:100262772 280.411