Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g925 ATGCGTGGACTGCGTATCATCCTTGGCGGTGTCAATCCCATGGTTTTATTCCCAATACGCTTCTACAATCCCAAGAGCATCATGGTGCATGTCCACTGCAGTAGCACCAAGCCTTCGCACACCTCTTATCCTCATATGGATATGCTACATTGTTGTCACCTTCAGATTCATCAAAATCCATGTCAGATGACGGGCCTCCTTCAGAGTCAACGTCAGCTGGTGCTCATATCTGTCGCTTCTTTTCTCAGGTGCAAGTTTAATACGGGTCTTGGTGGAAGCAACCCAAAGAAGGCCCTAGCTCTCTTTGCCATGCTTTTCTCATATATTATATATCTACATCCATGTAACCCCTCTAGTTTGGTGCATCATTGCATCTATTTCATCACCATCCTTCATTTCAAGCTCATCTGGAGTCTGCTCTCCAAGGAGTCGATTATCCTGTTGGATTTCTGGCCTAGCATGTTTGGTATGAGGGTCAGACTTGCCCTGGCAGAGAAGGGCCTCAAGTATGAATATAAAGAGGAGGACCTGAGGAACAAGAGCCCTCTGCTTCTTGAGATGAATCCAGTTCATAAGCAAATCCCGGTTCTGATCCACAATGGAAAGCCCATTTGTGAATCTCTGATAATAGTTCAGTATATTGATGAGGTTTGGCACGATAAATCTCCGCTTTTGCGTAGTGACCCATACCAGAGAGCTCAGGCCAGGTTCTGGGCGGACTACGTAGACAAGAAGCTCTATGGACTTGGAAGGAAGGTATGGTCTACCAAAGGAGAAGAGCAGGAAACAGCCAAGAAGGAATTCATAGAGTGCCTTCAGCTTTTGGAAGGCGAGCTTGGAGAGAAGCCTTACTTCGGTGGTGAAAAAATTGGGTTTGTGGATGTGGCTCTCGTGACCTTCTCTTGCTGGTTTTATGCATATGAGAGCTTTGGTAACTTCAGCATAGAGGCGGAGTGCCCCAAGTTGATCGCTTGGACCAAGAGGTGCAAGGAAAAGGAGAACCACACATGTCCCATGGCCTTGTCATGTGAATGA 1035 46.67 MRGLRIILGGVNPMVLFPIRFYNPKSIMVHVHCSSTKPSHTSYPHMDMLHCCHLQIHQNPCQMTGLLQSQRQLVLISVASFLRCKFNTGLGGSNPKKALALFAMLFSYIIYLHPCNPSSLVHHCIYFITILHFKLIWSLLSKESIILLDFWPSMFGMRVRLALAEKGLKYEYKEEDLRNKSPLLLEMNPVHKQIPVLIHNGKPICESLIIVQYIDEVWHDKSPLLRSDPYQRAQARFWADYVDKKLYGLGRKVWSTKGEEQETAKKEFIECLQLLEGELGEKPYFGGEKIGFVDVALVTFSCWFYAYESFGNFSIEAECPKLIAWTKRCKEKENHTCPMALSCE* 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 16675413 16687774 - Vvi19g925 Vvi19g925 782424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g925 344 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 228 344 IPR010987 -
Vvi19g925 344 Pfam Glutathione S-transferase, C-terminal domain 256 331 IPR004046 -
Vvi19g925 344 CDD GST_N_Tau 145 218 - -
Vvi19g925 344 Gene3D Glutaredoxin 141 227 - -
Vvi19g925 344 SUPERFAMILY GST C-terminal domain-like 216 333 IPR036282 -
Vvi19g925 344 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 143 222 IPR004045 -
Vvi19g925 344 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 144 335 - -
Vvi19g925 344 SFLD Main (cytGST) 142 334 - -
Vvi19g925 344 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 144 335 IPR045073 -
Vvi19g925 344 Pfam Glutathione S-transferase, N-terminal domain 144 216 IPR004045 -
Vvi19g925 344 SUPERFAMILY Thioredoxin-like 145 246 IPR036249 -
Vvi19g925 344 SFLD Main.3: Omega- and Tau-like 142 334 IPR045073 -
Vvi19g925 344 Gene3D - 228 340 - -
Vvi19g925 344 CDD GST_C_Tau 229 333 IPR045074 GO:0004364|GO:0006749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g925 K00799 - vvi:100257648 387.497