Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g928 | ATGAGGGTGCGACTGGCTTTGGCAGCCAAAGGGATCGAGTATCTGATTAAGGAAGAAGACTTGACCCAAAGTAAAAGCTCTCTACTCTTGAAAGTGAATCCAGTTCATCAGAAAATTCCAGTTCTAATTCACAATGGGAAGCCCGTATGCGAGTCCTTGATAATAGTGGAATACATTGATGAGGTTTGGAAGGATAGATGTCGTCTTCTGCCGGCTGACCCTTACCAAAGAGCAAAAGCCAAGTTCTGGGCCGACTTCATTGACAAAATGGTATACCCATCCTGTTATAACGTGTGGGCAGCAAACGGAGAAGTGCAAGAGGCTGGCAAGAAGGAATTCATAGACAGGATTAAGATGTTAGAAGGAGAGCTTAAGTCGAACCCTTACTTTGGGGGTGAGACTTTGGGTTTTCTGGACATTGTTTTTCTCCCATCGTACTACTGGTTCCATACATTCGAAACTTTTGGGAAGTTCAGCATAGAAGCGGAGTGTCCAAAGCTGGTGGCATGGGGTAAGAGGTGCATGGAGGAGGAGTTCGTGTACACCTCTCTCCCTCACCCACATAAGGTCTATGACTTGGTGGTGGATTACAGGAAGAAAATGGGGATATAG | 612 | 45.75 | MRVRLALAAKGIEYLIKEEDLTQSKSSLLLKVNPVHQKIPVLIHNGKPVCESLIIVEYIDEVWKDRCRLLPADPYQRAKAKFWADFIDKMVYPSCYNVWAANGEVQEAGKKEFIDRIKMLEGELKSNPYFGGETLGFLDIVFLPSYYWFHTFETFGKFSIEAECPKLVAWGKRCMEEEFVYTSLPHPHKVYDLVVDYRKKMGI* | 204 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 16915104 | 16916114 | - | Vvi19g928 | Vvi19g928 | 782427 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g928 | 203 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 61 | IPR004045 | - | |
| Vvi19g928 | 203 | CDD | GST_C_Tau | 74 | 197 | IPR045074 | GO:0004364|GO:0006749 | |
| Vvi19g928 | 203 | Gene3D | - | 73 | 203 | - | - | |
| Vvi19g928 | 203 | SUPERFAMILY | GST C-terminal domain-like | 61 | 201 | IPR036282 | - | |
| Vvi19g928 | 203 | SFLD | Main (cytGST) | 1 | 201 | - | - | |
| Vvi19g928 | 203 | PANTHER | S-TRANSFERASE TAU 22, PUTATIVE-RELATED | 1 | 199 | - | - | |
| Vvi19g928 | 203 | SUPERFAMILY | Thioredoxin-like | 1 | 65 | IPR036249 | - | |
| Vvi19g928 | 203 | Gene3D | Glutaredoxin | 1 | 72 | - | - | |
| Vvi19g928 | 203 | CDD | GST_N_Tau | 1 | 63 | - | - | |
| Vvi19g928 | 203 | Pfam | Glutathione S-transferase, C-terminal domain | 105 | 177 | IPR004046 | - | |
| Vvi19g928 | 203 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 73 | 203 | IPR010987 | - | |
| Vvi19g928 | 203 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 67 | IPR004045 | - | |
| Vvi19g928 | 203 | SFLD | Main.3: Omega- and Tau-like | 1 | 201 | IPR045073 | - | |
| Vvi19g928 | 203 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 199 | IPR045073 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi19g928 | K00799 | - | vvi:100232915 | 421.394 |