Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g928 ATGAGGGTGCGACTGGCTTTGGCAGCCAAAGGGATCGAGTATCTGATTAAGGAAGAAGACTTGACCCAAAGTAAAAGCTCTCTACTCTTGAAAGTGAATCCAGTTCATCAGAAAATTCCAGTTCTAATTCACAATGGGAAGCCCGTATGCGAGTCCTTGATAATAGTGGAATACATTGATGAGGTTTGGAAGGATAGATGTCGTCTTCTGCCGGCTGACCCTTACCAAAGAGCAAAAGCCAAGTTCTGGGCCGACTTCATTGACAAAATGGTATACCCATCCTGTTATAACGTGTGGGCAGCAAACGGAGAAGTGCAAGAGGCTGGCAAGAAGGAATTCATAGACAGGATTAAGATGTTAGAAGGAGAGCTTAAGTCGAACCCTTACTTTGGGGGTGAGACTTTGGGTTTTCTGGACATTGTTTTTCTCCCATCGTACTACTGGTTCCATACATTCGAAACTTTTGGGAAGTTCAGCATAGAAGCGGAGTGTCCAAAGCTGGTGGCATGGGGTAAGAGGTGCATGGAGGAGGAGTTCGTGTACACCTCTCTCCCTCACCCACATAAGGTCTATGACTTGGTGGTGGATTACAGGAAGAAAATGGGGATATAG 612 45.75 MRVRLALAAKGIEYLIKEEDLTQSKSSLLLKVNPVHQKIPVLIHNGKPVCESLIIVEYIDEVWKDRCRLLPADPYQRAKAKFWADFIDKMVYPSCYNVWAANGEVQEAGKKEFIDRIKMLEGELKSNPYFGGETLGFLDIVFLPSYYWFHTFETFGKFSIEAECPKLVAWGKRCMEEEFVYTSLPHPHKVYDLVVDYRKKMGI* 204
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 16915104 16916114 - Vvi19g928 Vvi19g928 782427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g928 203 Pfam Glutathione S-transferase, N-terminal domain 1 61 IPR004045 -
Vvi19g928 203 CDD GST_C_Tau 74 197 IPR045074 GO:0004364|GO:0006749
Vvi19g928 203 Gene3D - 73 203 - -
Vvi19g928 203 SUPERFAMILY GST C-terminal domain-like 61 201 IPR036282 -
Vvi19g928 203 SFLD Main (cytGST) 1 201 - -
Vvi19g928 203 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 1 199 - -
Vvi19g928 203 SUPERFAMILY Thioredoxin-like 1 65 IPR036249 -
Vvi19g928 203 Gene3D Glutaredoxin 1 72 - -
Vvi19g928 203 CDD GST_N_Tau 1 63 - -
Vvi19g928 203 Pfam Glutathione S-transferase, C-terminal domain 105 177 IPR004046 -
Vvi19g928 203 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 73 203 IPR010987 -
Vvi19g928 203 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 67 IPR004045 -
Vvi19g928 203 SFLD Main.3: Omega- and Tau-like 1 201 IPR045073 -
Vvi19g928 203 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 199 IPR045073 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g928 K00799 - vvi:100232915 421.394