Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g933 ATGAATCCAGTTCATAAAAAGATTCCCGTTTTGATTCACAACGGTAAGCCCATATGCGAGTCCTTGATAATAGTTGAATACATAGATGAGGTTTGGAAGGATAGATGTCCTCTGCTGCCATCTGATCCTTACCAAAAAGCAAAAGCAAAGTTCTGGGCTGACTTCATAGACAAAATGGTTTACCCATGCAGTAAGAAGCTGTGGACAGCCAAAGGAGAAGAGCAGGAGGCTAGCAAGAAGGAATTCCTAGATAGGATTAAACTATTGGAAGGAGAGCTTAAATCCTATCCTTACTTTGGTGGTGAGAGCTTGGGGTTTCTGGACATTGCTTTTCTCCCATTGTACTCCAGGTTCTACACATTTGAGGCTTTTGGGAACTTCAGCATAGAGGCCGAGTGTCCCAAATTGGTGGCATGGGGTAAGAGGTGTATGGAGGAGGAGTTCGTGTCCAGATCTCTTCCTCACCAACATAAGATCTATGATTTGGTGGTGGAGTTCACGAAGAACGTTGGGATATAG 519 43.93 MNPVHKKIPVLIHNGKPICESLIIVEYIDEVWKDRCPLLPSDPYQKAKAKFWADFIDKMVYPCSKKLWTAKGEEQEASKKEFLDRIKLLEGELKSYPYFGGESLGFLDIAFLPLYSRFYTFEAFGNFSIEAECPKLVAWGKRCMEEEFVSRSLPHQHKIYDLVVEFTKNVGI* 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 17210240 17211505 + Vvi19g933 Vvi19g933 782432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g933 172 Pfam Glutathione S-transferase, C-terminal domain 70 146 IPR004046 -
Vvi19g933 172 SUPERFAMILY Thioredoxin-like 1 34 IPR036249 -
Vvi19g933 172 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 42 166 IPR010987 -
Vvi19g933 172 SUPERFAMILY GST C-terminal domain-like 30 168 IPR036282 -
Vvi19g933 172 Gene3D - 42 172 - -
Vvi19g933 172 CDD GST_C_Tau 43 166 IPR045074 GO:0004364|GO:0006749
Vvi19g933 172 Pfam Glutathione S-transferase, N-terminal domain 2 30 IPR004045 -
Vvi19g933 172 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 167 IPR045073 -
Vvi19g933 172 SFLD Glutathione Transferase (cytosolic) 1 169 IPR040079 -
Vvi19g933 172 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 167 - -
Vvi19g933 172 Gene3D Glutaredoxin 1 41 - -
Vvi19g933 172 SFLD Main.3: Omega- and Tau-like 1 169 IPR045073 -
Vvi19g933 172 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 36 IPR004045 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g933 K00799 - vvi:100254975 362.844