Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g10 ATGTCTGTCGCAGCTCTTTCAGAGGCAGATAAAATTTACAAGAAGTCCTTCCACCGGAGGAATGATTCTGGCGAGCTTGATGTTTTTGAAGCTGCAAGGTATTTCTCCGGCGGCAATGAAATTATTGGAAGAAGAAATCAAAGTCCACAGCACAGTCGATCAAGGATGAAGAGGAGAGCCCGGGTGGGAGGAGGAAAAGGAGGAGCAGCATTAGCCATTTCCGGAGTTCCAGCACTGCTGATTCCAAGTCCGTGTATTCTTCCTCAAGTTCTGGCTTTAGAACTCCCCCTCCTTATGCAAATACTCCCACAAAGACCTACAAGGATCTCAGAAGCTATTCAGATCACAGGCAAGTGGTGCCTTGGACGAGAAGAGAATCAAAGAGTTGGTTTGGCTGGACGAGAAATTCAAATTCAGCATTGGATGAGATTGATGCCGGTGCGGAGAGTGATTCAAGCTCTGATCTATTCGAGCTGCAGAACTATGACTTGGGTTGCTACTCAAGTGGCTTACCCGTATATGAGACCACCCACATGGACAGCATCAAGAGAGGAGCACCCATTTCCAATGGCCCCCTACCCCTATAATAATTCTTTCCTCCACTTCTTTCTCTGTATGTACAGTTGGGAATGTCTGCTTGTCTTCCATTTCCGTTTTTTGTTTTTTAACCTTCAATTGCTTTTAGAGGTATGCTTGTGGAGTGCTGGAGCATTGGAAGTCCACCACTGGAATTGCTTGATTAGACTGCGGGATGATTTAGAGACCTTCCACTAA 774 45.99 MSVAALSEADKIYKKSFHRRNDSGELDVFEAARYFSGGNEIIGRRNQSPQHSRSRMKRRARVGGGKGGAALAISGVPALLIPSPCILPQVLALELPLLMQILPQRPTRISEAIQITGKWCLGREENQRVGLAGREIQIQHWMRLMPVRRVIQALIYSSCRTMTWVATQVAYPYMRPPTWTASREEHPFPMAPYPYNNSFLHFFLCMYSWECLLVFHFRFLFFNLQLLLEVCLWSAGALEVHHWNCLIRLRDDLETFH* 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 220861 222178 + Vvi1g10 Vvi1g10 769210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g10 257 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 62 IPR039621 GO:0009734
Vvi1g10 257 PANTHER PROTEIN BIG GRAIN 1-LIKE E 1 62 - -
Vvi1g10 257 MobiDBLite consensus disorder prediction 41 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g10 - - vvi:100266436 88.1965