Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g109 ATGAAAATACCCTTTTGCTTCTGGATCTCAGACTCCATTTGGGCAGTAACGGTTTCACTTCTCATACTCCATCTCTTCCTGCACGACTACTCTGGGTCCACCATAAGAGCTCCTGGGGCTTTGAAGAATCCAAACTTGACAAGCTGCATCTCTTTGAATGCTTCTGTAGTGGCTTCAGTTTTTATTGCTTCTCGCCTCCCATCAAGAATACAAGTTTTCGCCATCATGCTATTCTCCTTGCAAGTCTTCCTCTTTGCTCCACTCGTCACATACTGTATTAAGAAATACTCCTTCCAGTTACACCTCTGGTTCTCTTTCGGGTTGATGGTCTTGACACTGGCCTTCGTTTACATGCTGCATCGGCTACTTTTTGTGCTGCTGCTGGGTCTGTTGGTTTTTGTGACCGTGGTCTGTCCTTACTGGCTTATAAGGATTCAGGAATTCAAGTTTGAGATCAATGGCCCCTGGGATGAGGCTAAGCTCTGTTTTGACATTACAGAATGA 504 45.04 MKIPFCFWISDSIWAVTVSLLILHLFLHDYSGSTIRAPGALKNPNLTSCISLNASVVASVFIASRLPSRIQVFAIMLFSLQVFLFAPLVTYCIKKYSFQLHLWFSFGLMVLTLAFVYMLHRLLFVLLLGLLVFVTVVCPYWLIRIQEFKFEINGPWDEAKLCFDITE* 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1082206 1082935 + Vvi1g109 Vvi1g109 769309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g109 167 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT C 10 166 - -
Vvi1g109 167 Pfam Phosphatidylinositol N-acetylglucosaminyltransferase 10 157 IPR009450 GO:0006506|GO:0016021
Vvi1g109 167 PANTHER PHOSPHATIDYLINOSITOL GLYCAN, CLASS C 10 166 IPR009450 GO:0006506|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g109 K03859 - vvi:100261218 297.745