Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1091 ATGATTGGATGTGATGCATCAATCTTGCTTGATGATTCCTCCTCCATTCAAAGTGAGAAAAATACACCTAATAATTTGAATTCAGTTAGAGGATATGAAGTCATAGACCACGTAAAGTCTCAAGTGGAGAGCAACTGTCCCGGCATTGTATCTTGTGCTGACATTCTTGCAGTGGCAGCCCGAGATGCATCCGTTGCTGTTGGAGGGTCAACATGGACAGTGAAGCTTGGAAGAAGAGACTCCGCCACTTCAGGCCTCAGCCAAGCTTCCAACAACCTTCATAATTTGAGAGATAGCCTTGGTAGGCTTATTTCCTTGTTTGGTAGCAAAGGTTTGAGTACAAGATACATGGTTGCCCTTTCAGGTTCCCACACAATAGGCCAAGCAAGATGTGTGACATTCCAGGATAGGATATACTACAATGGAACTAATATTGACGCCAGCTTTGCTAGTACCAGAAGATGCTGTTGTCCTTCTAATAATGGGGATGGTGATGACAATCTTGCAGCCCTAGATTTGGTTACACCCTGA 531 44.07 MIGCDASILLDDSSSIQSEKNTPNNLNSVRGYEVIDHVKSQVESNCPGIVSCADILAVAARDASVAVGGSTWTVKLGRRDSATSGLSQASNNLHNLRDSLGRLISLFGSKGLSTRYMVALSGSHTIGQARCVTFQDRIYYNGTNIDASFASTRRCCCPSNNGDGDDNLAALDLVTP* 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18557850 18558676 + Vvi1g1091 Vvi1g1091 770291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1091 176 Gene3D - 1 99 - -
Vvi1g1091 176 PANTHER PEROXIDASE 2 176 - -
Vvi1g1091 176 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 ProSiteProfiles Plant heme peroxidase family profile. 1 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 Gene3D Peroxidase, domain 2 100 176 - -
Vvi1g1091 176 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PRINTS Plant peroxidase signature 115 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PRINTS Plant peroxidase signature 170 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 PANTHER PEROXIDASE 72-RELATED 2 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 Pfam Peroxidase 3 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1091 176 SUPERFAMILY Heme-dependent peroxidases 3 176 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1091 K00430 - vvi:100259700 274.633