Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1095 ATGGCAGCATCGCTGATTCGTCTCCACTTCCACGATTGCTTTGTTCAGGGCTGTGATGCATCAATCTTGCTTGACGATTCCTCCTCCATTCAAAGCGAGAAGAATGCACCTAATAATTTGAATTCAGTTAGAGGGTATGAAGTCATAGATAATATCAAGTCCAAGGTGGAGAGCATTTGTCCAGGCGTTGTATCTTGTGCAGACATTGTTGCAGTCGCAGCCCGAGATGCATCTGTTGCTGTTAGTGGCCCAACATGGACAGTGAAGCTTGGAAGAAGAGACTCCACCACTTCAGGCCTCAGCCTAGCTGCAACCAACCTACCAAGCTTTAGGGACAGCCTCGACAAGCTTGTTTCCTTGTTCGGCAGCAAAGGTTTGAGTGCAAGAGACATGGTGGCCCTTTCTGGTTCTCATACAATTGGTCAAGCTAGATGCGTGACATTCCGGGATAGGGTATACAATGGAACTGACATTGACGCTGGCTTTGCCAGTACCAGGAGACGCCGTTGTCCTGCTGATAATGGGAATGGTGATGCCAATCTTGCACCCCTTGAGTTGGTGACACCCAATTCTTTTGATAACAATTACTTCAAGAATCTCATTCAAAGGAAAGGCCTTCTTCAATCCGACCAAGTACTTTTTAGTGGAGGATCCACCGACACTATTGTCAATGAATACAGCAAGAGCCCAAAAACTTTCAGGTCTGACTTTGCATCTGCCATGGTAAAGATGGGAGATATCGAACCTCTTACTGGATCTGCTGGAGTGATACGGAAATTCTGCAACGTCATAAACTAA 798 46.24 MAASLIRLHFHDCFVQGCDASILLDDSSSIQSEKNAPNNLNSVRGYEVIDNIKSKVESICPGVVSCADIVAVAARDASVAVSGPTWTVKLGRRDSTTSGLSLAATNLPSFRDSLDKLVSLFGSKGLSARDMVALSGSHTIGQARCVTFRDRVYNGTDIDAGFASTRRRRCPADNGNGDANLAPLELVTPNSFDNNYFKNLIQRKGLLQSDQVLFSGGSTDTIVNEYSKSPKTFRSDFASAMVKMGDIEPLTGSAGVIRKFCNVIN* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18621156 18622440 + Vvi1g1095 Vvi1g1095 770295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1095 265 CDD secretory_peroxidase 1 264 IPR033905 GO:0004601|GO:0042744
Vvi1g1095 265 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 199 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Plant peroxidase signature 239 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Vvi1g1095 265 ProSiteProfiles Plant heme peroxidase family profile. 1 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Vvi1g1095 265 PANTHER PEROXIDASE 1 263 - -
Vvi1g1095 265 Gene3D - 1 261 - -
Vvi1g1095 265 PANTHER PEROXIDASE 72-RELATED 1 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 SUPERFAMILY Heme-dependent peroxidases 1 265 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 Pfam Peroxidase 1 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 Gene3D Peroxidase, domain 2 108 244 - -
Vvi1g1095 265 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1095 265 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1095 K00430 - vvi:100264755 501.901