Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1098 ATGGGCTCAATAGCAGGGAATTATGGTGCATGCATTTTTGTGGCAGTTTTATTGATTCTCTCGATCATGCCATGTGAAGCTCAGCTTTCTTCATCATTCTACGATAATACATGTCCAAAGGCACTCAGTACCATCCGAACAGCGACAAGGAAGGCGGTATCTCGTGAGCGTAGAATGGCGGCATCTCTAATTCGTCTCCATTTCCACGATTGCTTTGTTCAGGGATGTGATGCATCAATCTTGCTTGATGATTCCTCCTCCATTCAAAGTGAGAAAAATGCACCTAATAATTTGAATTCAGCTAGAGGATATGAAGTCATACACGATGTAAAGTCTCAAGTGGAGAGCATCTGTCCCGGCATTGTATCTTGTGCTGACATTCTTGCAGTGGCAGCCCGAGATGCATCTGTTGCTGTTGGAGGGCCAACATGGACAGTGAAGCTTGGAAGAAGAGACTCCACCACTTCAGGCCTCAGCCAAGTTTCCAGCAACCTTCCTAGCTTCAGAGATAGCCTTGACAGGCTTATCTCCTTGTTTGGTAGCAAAGGTTTGAGTACAAGAGACATGGTTGCCCTCTCAGGTTCTCATACAATAGGCCAAGCAAGATGTGTGACATTCCGGGATAGGATATACGACAATGGAACTGATATTGACGCGGGCTTTGCTAGTACCAGGAGACGCCGCTGTCCTGCTGATAATGGGGATGGTGATGACAATCTTGCAGCCCTCGATTTGGTGACACCCAACTCTTTTGATAACAATTACTTCAAGAATCTCATTCAAAAAAAGGGTCTTCTTCAATCAGACCAAGTACTTTTCAGCGGAGGATCCACAGACAGTATTGTCAGTGAATATAGCAAGAACCGTAAAACTTTCAGTTCTGATTTCGCATTAGCCATGCCGTTTGGACGATTTCTTTATTGGGTTTCATCTCAAGGATTACATTGTTTCGGAGAGTGGGTGGATTGGGCACGATTCTGGGCACTACCAGGTGATGATGAACGGGCGTTTGAACTGCTTTGCGCAGGTGTTGAGTGGGAATTGTCTTGCGGAATTGGAAGATGCTGTTGA 1071 45.47 MGSIAGNYGACIFVAVLLILSIMPCEAQLSSSFYDNTCPKALSTIRTATRKAVSRERRMAASLIRLHFHDCFVQGCDASILLDDSSSIQSEKNAPNNLNSARGYEVIHDVKSQVESICPGIVSCADILAVAARDASVAVGGPTWTVKLGRRDSTTSGLSQVSSNLPSFRDSLDRLISLFGSKGLSTRDMVALSGSHTIGQARCVTFRDRIYDNGTDIDAGFASTRRRRCPADNGDGDDNLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSKNRKTFSSDFALAMPFGRFLYWVSSQGLHCFGEWVDWARFWALPGDDERAFELLCAGVEWELSCGIGRCC* 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18645673 18653975 - Vvi1g1098 Vvi1g1098 770298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1098 356 Gene3D - 33 165 - -
Vvi1g1098 356 CDD secretory_peroxidase 28 300 IPR033905 GO:0004601|GO:0042744
Vvi1g1098 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vvi1g1098 356 SUPERFAMILY Heme-dependent peroxidases 28 300 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 ProSiteProfiles Plant heme peroxidase family profile. 28 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PANTHER PEROXIDASE 10 300 - -
Vvi1g1098 356 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PANTHER PEROXIDASE 72-RELATED 10 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vvi1g1098 356 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1098 356 Gene3D Peroxidase, domain 2 166 300 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1098 K00430 - vvi:100259700 569.696