Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1099 ATGCCATGTGAAGCTCAGCTATCTTCCTCATTCTACGATAACACCTGTCCAAAAGCCCTCAGTACCATCCGGACAGCGGTCAGGACTGCTGTATCTCGTGAGCGTAGAATGGCAGCATCTCTAATTCGTCTCCACTTCCATGATTGCTTCGTCCAGGGCTGCGATGCATCAATCTTGCTTAATGATTCCTCCTCCATTCAAAGCGAGAAAAATGCTCCCAATAATTTGAATTCAGTTCGAGGATACGATGTCATAGATGATGTCAAGTCTGAAGTGGAGAGCATTTGTCCCGGTATTGTATCGTGTGCTGACATTCTAGCAGTGGCAGCTCGGGATGCATCCGTCGCTGTGAGTGGGCCAACATGGACAGTGAATCTTGGAAGAAGAGATTCCACAACCTCAGGCCTAAGCCAAGCTGCCACCAACCTTCCTAACTTCAGTGACGGCCTCGACAGGCTTATTTCCTTGTTCGGTAGCAAAGGTTTGAGCGAAAGAGACATGGTTGCCCTTTCAGGTTCCCACACGATAGGCCAAGCAAGATGTGTGACATTCCGGGATAGGATATACGACAATGGAACTGATATTGACGCTGGCTTTGCTAGTACCAGGAGACGCCGCTGTCCTGCTACTAGTGGGGATGGTGATGACAATATTGCAGCCCTGGATTTGGTGACACCCAATTCTTTTGATAACAATTACTTCAAGAATCTCATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTACTTTTCAGCGGAGGTTCTACTGACAGTATCGTCACTGGGTATAGCAAGAGCCCTTCAACATTCAGCTCTGATTTTGCATCAGCCATGGTTAAGATGGGAAATATTGAACCTCTCACTGGCTCTGCCGGAGAGATACGAAAACTCTGTAGTGCTATAAATTGA 909 46.97 MPCEAQLSSSFYDNTCPKALSTIRTAVRTAVSRERRMAASLIRLHFHDCFVQGCDASILLNDSSSIQSEKNAPNNLNSVRGYDVIDDVKSEVESICPGIVSCADILAVAARDASVAVSGPTWTVNLGRRDSTTSGLSQAATNLPNFSDGLDRLISLFGSKGLSERDMVALSGSHTIGQARCVTFRDRIYDNGTDIDAGFASTRRRRCPATSGDGDDNIAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVTGYSKSPSTFSSDFASAMVKMGNIEPLTGSAGEIRKLCSAIN* 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18657362 18658552 - Vvi1g1099 Vvi1g1099 770299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1099 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 166 176 IPR019793 -
Vvi1g1099 302 PANTHER PEROXIDASE 72-RELATED 3 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 ProSiteProfiles Plant heme peroxidase family profile. 6 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 SUPERFAMILY Heme-dependent peroxidases 6 302 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 16 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 40 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 118 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 165 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 220 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 236 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 ProSitePatterns Peroxidases active site signature. 38 49 IPR019794 GO:0004601
Vvi1g1099 302 PANTHER PEROXIDASE 3 301 - -
Vvi1g1099 302 PRINTS Haem peroxidase superfamily signature 38 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Haem peroxidase superfamily signature 118 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Haem peroxidase superfamily signature 166 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 PRINTS Haem peroxidase superfamily signature 222 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1099 302 Gene3D Peroxidase, domain 2 144 281 - -
Vvi1g1099 302 Gene3D - 11 302 - -
Vvi1g1099 302 CDD secretory_peroxidase 6 301 IPR033905 GO:0004601|GO:0042744
Vvi1g1099 302 Pfam Peroxidase 24 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1099 Vvi14g1159 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1099 K00430 - vvi:100263220 590.112