Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g110 ATGTGGATTGCACCCATTGCAATCTTATATGGTTTTAACCATAATTTGTTTCCTGGTTCAACCCAGTTGTCCTCCTATTCTGCCACGCTGTTGAGCGGATTCATTGCTGTCATATCAGTCAATATAGTTATCGCCTTCTACATTTTTATGGCAATGAAGGAACCTTCAGACAAACATGAACCAGATCCTGCTTTTCTTGCTGCTGCCAAGGCCAGTGTAAGCCAATCTACACCTGGTGAAACTGAGGATCCTTCCCAATCCCGTGATAAACAAGAATAG 279 42.65 MWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAFYIFMAMKEPSDKHEPDPAFLAAAKASVSQSTPGETEDPSQSRDKQE* 93
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1082988 1085765 - Vvi1g110 Vvi1g110 769310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g110 92 MobiDBLite consensus disorder prediction 69 92 - -
Vvi1g110 92 Pfam VMA21-like domain 1 52 IPR019013 GO:0070072
Vvi1g110 92 PANTHER VACUOLAR ATPASE ASSEMBLY INTEGRAL MEMBRANE PROTEIN VMA21 1 92 IPR019013 GO:0070072
Vvi1g110 92 PANTHER VACUOLAR ATPASE ASSEMBLY INTEGRAL MEMBRANE PROTEIN VMA21 1 92 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g110 K23952 - vri:117911895 180.259