Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g1122 | ATGCCTACTGTAGCAGTGAAGCTGGATGACAGCTACGGCGGGTATTCGCCGTCGGCTGGTAGGAGTGGGCGAAGGTTGCCGGTGTTGTTGCAGTTTCATGGAGGAGGATTTGTGAGTGGGAGTAACAATTCGGTGGCGAATGATGTGTTCTGTAGGAGGATTGCGAAGCTGTGCGATGTGGTGGTGGTGGCAGTGGGGTATCGGCTGGCGCCGGAGAATCGGTACCCGGCTGCGTTTGAGGATGGGGTGAGGGCGTTGCATTGGGTGGGGAAGCAGGCGAATTTGGCGGATTGGAGCAGATCGCAGTGGAAGGTGGGTAGGGATACTATGAATGATAACTTTGGAGCTTCCATGGTTGAGCCTTGGTTGGCGGCTCATGGCGATCCTTCCAGGTGTGTTCTCCTTGGGGTGAGCTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAGGTCTGTAGAGGCAGGCAAGCTTTTAGACCCTGTTAAGCTATGTGCTTGCTTGCATGGAAACTCTTCCTACCTGAGGAAGAAGTGA | 534 | 54.49 | MPTVAVKLDDSYGGYSPSAGRSGRRLPVLLQFHGGGFVSGSNNSVANDVFCRRIAKLCDVVVVAVGYRLAPENRYPAAFEDGVRALHWVGKQANLADWSRSQWKVGRDTMNDNFGASMVEPWLAAHGDPSRCVLLGVSCGANIADYVARRSVEAGKLLDPVKLCACLHGNSSYLRKK* | 178 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 19226854 | 19229542 | + | Vvi1g1122 | Vvi1g1122 | 770322 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g1122 | 177 | SUPERFAMILY | alpha/beta-Hydrolases | 15 | 158 | IPR029058 | - | |
| Vvi1g1122 | 177 | Gene3D | alpha/beta hydrolase | 4 | 171 | IPR029058 | - | |
| Vvi1g1122 | 177 | PANTHER | CARBOXYLESTERASE 11-RELATED | 10 | 159 | - | - | |
| Vvi1g1122 | 177 | PANTHER | ARYLACETAMIDE DEACETYLASE | 10 | 159 | - | - | |
| Vvi1g1122 | 177 | Pfam | alpha/beta hydrolase fold | 29 | 167 | IPR013094 | GO:0016787 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi1g1122 | - | - | vvi:100251099 | 316.62 |