Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1123 ATGCCTCCAACACTGACAGTTGTGGCAGAGCATGACTGGATGCGAGACCGAGCCATTGCTTATTCAGAGGAGCTCCGGAAAGCCCAAGCCTGTGCTGAGGACATTGCCATATGGGTCAAGAAGTATATTTCACTCAGAGGCCATGAGTTTTCTTATTGA 159 49.06 MPPTLTVVAEHDWMRDRAIAYSEELRKAQACAEDIAIWVKKYISLRGHEFSY* 53
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19229545 19230041 + Vvi1g1123 Vvi1g1123 770323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1123 52 Pfam alpha/beta hydrolase fold 1 30 IPR013094 GO:0016787
Vvi1g1123 52 PANTHER ARYLACETAMIDE DEACETYLASE 1 32 - -
Vvi1g1123 52 PANTHER CARBOXYLESTERASE 16-RELATED 1 32 - -
Vvi1g1123 52 Gene3D alpha/beta hydrolase 1 49 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1123 Vvi14g1234 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1123 - - oeu:111409288 96.2857