Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1139 ATGTCAAAAGTCGATCCCTTCATCCAATTCTCCGATAAAGGTATTGATGATACCAGCATTCCATTTGGACCAGTCGAAGCTAGTGGCAGGCCAACACTCAATCTTGAGAGACAGTTGGATCATGATGGACATCCTCTTGCTATAACCTCAGCTGATGCAGTCACTGCAAATGGAGTTCCTCCTTGGAACTGGAGAGAGACCCCTGGAAGTGGTGGTGAGAGTCAATCATATGGTGGGAGGGTAATATCAGTCAAGTGGGGGGATTATACAAGAAGGATTGGTATTGATGGCACTGCAGATGCCATCAAGGAAGCAATCAAGTCTGCATTCAGGTTAAGAACTAAACGTGGATTTTGGCTGGAGGATGAAGATCAGATAATTCGGACTCTTGACAGGGACATGCCTTTGGGAAGCTACAGTCTTCACCTTGATGAAGGAATAGGCATAAAAGTGTGCCATTATGATGAGTCGGAGCACATACCAGTCCACACAGAGGAGAAGACGTTTTATACTGAAGAAGATTTCCGTGATTTTCTGACCCGTCGGGGATGGTCTTCTCTTAGGGAGTTAAATGGGTACAGAAACATTGACAATATGGATGATCTTCGTCCTGATTCATTATACCGTGGGATGAGTTAA 639 44.76 MSKVDPFIQFSDKGIDDTSIPFGPVEASGRPTLNLERQLDHDGHPLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRVISVKWGDYTRRIGIDGTADAIKEAIKSAFRLRTKRGFWLEDEDQIIRTLDRDMPLGSYSLHLDEGIGIKVCHYDESEHIPVHTEEKTFYTEEDFRDFLTRRGWSSLRELNGYRNIDNMDDLRPDSLYRGMS* 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19500061 19509471 + Vvi1g1139 Vvi1g1139 770339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1139 212 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 2 211 - -
Vvi1g1139 212 PANTHER - 2 211 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1139 Vvi14g1226 ECH
Vvi1g1139 Vvi17g919 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1139 - - vvi:100249383 443.736