Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1147 ATGATCACCGGAGGCAAATCCTTGCAGAAGTTCCATAACACAGTCTGTCCCAGCTGCAAGCTAATCAAGACCGCCTACTTCATCATGATTTTTGCTTCTTGTCACTTTGTTCTATCCCATTTGCCCAATTTCAAATTCATTGCTGGTGTCTCATTTGCTGCTGCAATCATGTCCTTAACTTACTCAACTATTGCCTGGACAGCTTCGGTTCATAAAGGTGTCCAACCAGATGTGCAATATACATACACAGCTTCGACCACAACTGGAAGAGTCTTCAACTTCTTTAGCGCCTTGGGTGACGTAGCATTTGCCTATGCTGGTCACAATGTGGTGTTGGAGATCCAAGCAACAATTCCCTCCACTCCTGAGAAGCCTTCCAAGAGACCCATGTGGAAAGGAGTGATTTTCGCTTATATTGTTGTTGCCTTGTGCTACTTCCCTGTCGCTCTGATTGGATACTGGATGTTTGGGAACAGTGTTGCTGACAATATCCTTATCACACTGGAGAAACCCCGCTGGCTTATAGCAGCAGCCAACCTGTTTGTTTTCATCCATGTTATTGGAAGTTACCAGATATATGCGATGCCAGTGTTTGACATGTTGGAAACATTCTTGGTGAAGAAACTGAAATTCACACCATGTTTCAGGCTTCGTCTTATTACCCGCACTCTATACGTTGCTTTTACAATGTTTATAGGCATGTTGATCCCTTTCTTTGGTAGCCTGCTTGGGTTCTTAGGAGGATTGGTGTTTGCACCAACGACCTACTTTCTCCCCTGTATCATGTGGCTTGCAATTTACAAACCCAAAAGGTTTAGCCTAACATGGTTTACAAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTTTTGGCAGGGCAAGTTGACAAGGGCTAA 972 39.3 MITGGKSLQKFHNTVCPSCKLIKTAYFIMIFASCHFVLSHLPNFKFIAGVSFAAAIMSLTYSTIAWTASVHKGVQPDVQYTYTASTTTGRVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKRPMWKGVIFAYIVVALCYFPVALIGYWMFGNSVADNILITLEKPRWLIAAANLFVFIHVIGSYQIYAMPVFDMLETFLVKKLKFTPCFRLRLITRTLYVAFTMFIGMLIPFFGSLLGFLGGLVFAPTTYFLPCIMWLAIYKPKRFSLTWFTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFLAGQVDKG* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19574854 19576375 - Vvi1g1147 Vvi1g1147 770347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1147 323 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 3-RELATED 1 281 - -
Vvi1g1147 323 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Vvi1g1147 323 PANTHER OS05G0424000 PROTEIN-RELATED 1 281 - -
Vvi1g1147 323 Pfam Transmembrane amino acid transporter protein 1 278 IPR013057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1147 Vvi14g1175 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1147 - - vvi:100247632 534.643