Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g115 ATGGCGAAGAGTGAGGAGAACGGAAAACCGGTTCGTGTGTATGCTGATGGCATATACGATCTCTTCCATTTCGGCCATGCCCGCTCTCTTGAGCAAGCCAAGAAACTGTTTCCAAACACATATCTGCTTGTTGGTTGCTGCAATGATGAAGTCACTCACAAATACAAGGGCAAAACTGTTATGACCGGCTCTGAGCGCTATGAATCTCTTCGCCATTGCAGGTGGGTCGATGAGGTTATTCCTGATGCACCATGGGTGCTCACACAAGAGTTCATTGACAAACATGAGATTGATTATGTCGCACACGACTCTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAAGATGTCTATGAATTTGTTAAGTCCATTGGAAAGTTTAAGGAAACAAAACGTACAGATGGGATCTCTACATCAGATATAATAATGAGGATTGTTAAAGATTATAACCAGTATGTGATGCGTAACTTGGACCGTGGATATACAAGAAAGGATCTTGGTGTTAGCTATGTGAAGGAAAAGAGGCTGAGGGTGAACATGGGATTAAAAAAGCTGCACGAGAAAGTGAAGAAGCATCAAGAAAAAGTGGGAGAAAAGATACAAATAGTAGCCAAAACTGCTGGTATGCATAGAAATGAATGGGTGGAGAATGCTGATCGATTTGTTGCTGGATTTCTTGAGATGTTTGAAGAAAGTTGCCACAAAATGGGAACGGCCATTAGAGATAGAATTCAGGAGCAACTAAAGAGGCAGCAGTTAAGAGGGCTCCTATATGACAAAGAGGATGATGATGACGACGACAATGATGATTACTTCTATGATGACAGCACCGAAGAAGAAGAATACTACGAGAATGAAGATGAAAAATAA 870 41.72 MAKSEENGKPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEVTHKYKGKTVMTGSERYESLRHCRWVDEVIPDAPWVLTQEFIDKHEIDYVAHDSLPYADASGAGKDVYEFVKSIGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMGLKKLHEKVKKHQEKVGEKIQIVAKTAGMHRNEWVENADRFVAGFLEMFEESCHKMGTAIRDRIQEQLKRQQLRGLLYDKEDDDDDDNDDYFYDDSTEEEEYYENEDEK* 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1121378 1125903 - Vvi1g115 Vvi1g115 769315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g115 289 MobiDBLite consensus disorder prediction 260 289 - -
Vvi1g115 289 PANTHER CYTIDYLYLTRANSFERASE 3 285 IPR045049 GO:0004105|GO:0006657
Vvi1g115 289 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 3 285 - -
Vvi1g115 289 Pfam Cytidylyltransferase-like 14 143 IPR004821 GO:0003824|GO:0009058
Vvi1g115 289 SUPERFAMILY Nucleotidylyl transferase 12 144 - -
Vvi1g115 289 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 12 79 IPR004821 GO:0003824|GO:0009058
Vvi1g115 289 CDD CCT 9 160 IPR041723 -
Vvi1g115 289 MobiDBLite consensus disorder prediction 256 289 - -
Vvi1g115 289 Gene3D HUPs 1 231 IPR014729 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g115 K00968 - vvi:100245839 536.569