Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g120 ATGATAAAAAAAAATTTTAATATTACAAATGCTTCAAGCAGCGAAAGCGCGAGAAAGTGCGAGAAAATGGCGAGAAACTCCGTTCTTCTGCGACACCTCCTTCGATTCTCTCCCTCGTCTCGCGCTCGTTCTTCTTCTCTGATCGAGACCCTAGCTTCATCTCCGATTGCTGTCCCATCCCCTCCCATTCATACAATTTCCTCCTTTTTCACCACCGCCACCGCTAACTCTCAGTTCTCGCGGCCTTGTTTGAATTACCGTACACTTTGCTCTTCCTCAGGTCAATCAAAAATTGCTCTGATTAAATCAGAAGAAGAGTTCAATACTTCACTTAGCAAGGTTCAAGATGAATCTTTGCCTGCAATTTTCTACTTCACTGCAGTATGGTGTGGGCCTTGCAGGTTTATAGCTCCTATCATAGCAGAGTTAAGTGAAAAGTACCCTCATGTCACCACATACAAGATTGACATTGATCAGGATGGGCTTGAAAACACCCTAAGAAGGTTAAATATTGCCTCCGTGCCAACACTCCACTTCTTTCAAAATGGGAAAAAGGCAGCTGAAATAATCGGTGCTGATGTTGCCCGCTTGAAGGATACCATGGATAAACTCTACAAGAAGGACTGA 627 43.7 MIKKNFNITNASSSESARKCEKMARNSVLLRHLLRFSPSSRARSSSLIETLASSPIAVPSPPIHTISSFFTTATANSQFSRPCLNYRTLCSSSGQSKIALIKSEEEFNTSLSKVQDESLPAIFYFTAVWCGPCRFIAPIIAELSEKYPHVTTYKIDIDQDGLENTLRRLNIASVPTLHFFQNGKKAAEIIGADVARLKDTMDKLYKKD* 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1191518 1197413 + Vvi1g120 Vvi1g120 769320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g120 208 Gene3D Glutaredoxin 93 206 - -
Vvi1g120 208 CDD TRX_family 105 193 - -
Vvi1g120 208 ProSiteProfiles Thioredoxin domain profile. 77 206 IPR013766 -
Vvi1g120 208 PRINTS Thioredoxin family signature 121 129 - -
Vvi1g120 208 PRINTS Thioredoxin family signature 129 138 - -
Vvi1g120 208 PRINTS Thioredoxin family signature 170 181 - -
Vvi1g120 208 PANTHER THIOREDOXIN 23 206 - -
Vvi1g120 208 Pfam Thioredoxin 103 202 IPR013766 -
Vvi1g120 208 PANTHER THIOREDOXIN O1, MITOCHONDRIAL 23 206 - -
Vvi1g120 208 SUPERFAMILY Thioredoxin-like 92 206 IPR036249 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g120 K03671 - vvi:100261132 353.599